RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RGS11O94810 467 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 SFT2D2O95562 160 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 OR4A8P0C604 315 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 OR5AC1P0C628 307 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 RAP2BP61225 183 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 COL10A1Q03692 680 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 ABCA11PQ4W5N1 156 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 CD177Q8N6Q3 437 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 TMEM185AQ8NFB2 350 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 RTN4IP1Q8WWV3 396 aaPredicted RBP6.55□□□□□ -1.36
NEK3-207ENST00000617054 VKORC1Q9BQB6 163 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 PIGMQ9H3S5 423 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 PLK3Q9H4B4 646 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 JKAMPQ9P055 326 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 SPEF1Q9Y4P9 236 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.55□□□□□ -1.36
NEK3-207ENST00000617054 GNRHRP30968 328 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 GLIPR1P48060 266 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 DHODHQ02127 395 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 ZNF146Q15072 292 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 ZMYND11Q15326 602 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 MEX3BQ6ZN04 569 aaKnown RBP6.55□□□□□ -1.36
NEK3-207ENST00000617054 ZNF818PQ6ZRF7 136 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 GCSAMQ8N6F7 178 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 POC1AQ8NBT0 407 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 CCL28Q9NRJ3 127 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 SLC2A9Q9NRM0 540 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 KIF25Q9UIL4 384 aa6.55□□□□□ -1.36
NEK3-207ENST00000617054 ERRFI1Q9UJM3 462 aaPredicted RBP6.55□□□□□ -1.36
NEK3-207ENST00000617054 IGHV3-43A0A0B4J1X8 118 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A10PA6NDY2 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A18PA6NE21 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A16PA6NEW6 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A20PA6NIJ5 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A8PA6NJQ4 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A7PA6NKC0 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 TMEM210A6NLX4 147 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 CEACAM18A8MTB9 384 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A22PA8MWA6 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A12PA8MX19 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A5PA8MXJ8 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 DEFB108AA8MXU0 73 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A23PA8MXZ1 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 TRDCB7Z8K6 153 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A15PP0C7V4 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A13PP0C7W8 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A14PP0C7W9 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FAM90A24PP0C7X0 464 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 IGHV3-43DP0DP04 118 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 PCSK4Q6UW60 755 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 FGFRL1Q8N441 504 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 MRGPRDQ8TDS7 321 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 CLEC4MQ9H2X3 399 aaPredicted RBP6.54□□□□□ -1.36
NEK3-207ENST00000617054 MYOZ1Q9NP98 299 aaPredicted RBP6.54□□□□□ -1.36
NEK3-207ENST00000617054 RNF150Q9ULK6 438 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 CENPEQ02224 2701 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 CELSR1Q9NYQ6 3014 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 USF3Q68DE3 2245 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 MYO18BQ8IUG5 2567 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 HSPA12AO43301 675 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 IFNA2P01563 188 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 IGHV1-46P01743 117 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 TK1P04183 234 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 PSG2P11465 335 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 OMGP23515 440 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 CD80P33681 288 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 GLP1RP43220 463 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 HERV-K104P61576 105 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 IL13RA2Q14627 380 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 ADIPOQQ15848 244 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 LYZL2Q7Z4W2 148 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 GAPTQ8N292 157 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 MEGF10Q96KG7 1140 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 TP53RKQ96S44 253 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 HEXA-AS1Q9H8Q6 139 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 TAF9BQ9HBM6 251 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 RASL12Q9NYN1 266 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 ELOVL5Q9NYP7 299 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 DNAJB11Q9UBS4 358 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 DYSFO75923 2080 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 IGKV1D-17A0A075B6S4 117 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 DBX1A6NMT0 343 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 L7N2F9 121 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 PHF1O43189 567 aaPredicted RBP6.54□□□□□ -1.36
NEK3-207ENST00000617054 NXPH3O95157 252 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 SSTR5P35346 364 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 CA7P43166 264 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 UQCRFS1P47985 274 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 LINC00205P59089 165 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 ADORA2A-AS1P86434 159 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 RBM39Q14498 530 aaKnown RBP6.54□□□□□ -1.36
NEK3-207ENST00000617054 ZNF497Q6ZNH5 498 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 ZNF546Q86UE3 836 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 SGPP2Q8IWX5 399 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 OR1L1Q8NH94 360 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 MRPL24Q96A35 216 aaKnown RBP6.54□□□□□ -1.36
NEK3-207ENST00000617054 SHARPINQ9H0F6 387 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 ARL6Q9H0F7 186 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 SPACA1Q9HBV2 294 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 HES4Q9HCC6 221 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms