RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM90A20PA6NIJ5 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A8PA6NJQ4 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A7PA6NKC0 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 LRRC30A6NM36 301 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A22PA8MWA6 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A12PA8MX19 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A5PA8MXJ8 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A23PA8MXZ1 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 K7EIL1 84 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 AKR7A2O43488 359 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A15PP0C7V4 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A13PP0C7W8 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A14PP0C7W9 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A24PP0C7X0 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 CA6P23280 308 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 GPM6AP51674 278 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 TAS2R19P59542 299 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 ZP1P60852 638 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 UNC119Q13432 240 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 ARFRP1Q13795 201 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 PRAMEF6Q5VXH4 476 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 CD276Q5ZPR3 534 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 GDPD3Q7L5L3 318 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 C1orf87Q8N0U7 546 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 ADAT1Q9BUB4 502 aaKnown RBP14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 PKIBQ9C010 78 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 LPAR5Q9H1C0 372 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 BANF2Q9H503 90 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 CTSZQ9UBR2 303 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 RBMX2Q9Y388 322 aaKnown RBP14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 NOTCH3Q9UM47 2321 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 hCG_2014768A0A024R1R8 64 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 SERPINE3A8MV23 424 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 CA11O75493 328 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 AKAIN1P0CW23 69 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 HAAOP46952 286 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 SRP9P49458 86 aaKnown RBP14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 NPY4RP50391 375 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 NRARPQ7Z6K4 114 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 NKX3-1Q99801 234 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 PPA2Q9H2U2 334 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 KCNK15Q9H427 330 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 ZNRD1Q9P1U0 126 aa14.37□□□□□ -0.11
TRAPPC3-209ENST00000616395 ANKRD20A5PA0PJZ0 165 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 RAB27BO00194 218 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 PLA2G10O15496 165 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 DHFRP00374 187 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 HIST1H1DP16402 221 aaKnown RBP14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 TBPP20226 339 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 BLVRBP30043 206 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 ARF6P62330 175 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 MAB21L1Q13394 359 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 RSBN1Q5VWQ0 802 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 C1orf122Q6ZSJ8 110 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 SLC25A26Q70HW3 274 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 LINC00596Q86U02 117 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM89BQ8N5H3 189 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 DUSP18Q8NEJ0 188 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 OR4S1Q8NGB4 309 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 GPX8Q8TED1 209 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 AQP3Q92482 292 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 PPP1R14BQ96C90 147 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 UFSP2Q9NUQ7 469 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 PLEKHJ1Q9NW61 149 aa14.36□□□□□ -0.11
TRAPPC3-209ENST00000616395 A0A1B0GWJ7 208 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 J3QT63 122 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 FBP1P09467 338 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 IL24Q13007 206 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 MEF2DQ14814 521 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 NSUN5P1Q3KNT7 163 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 ZNF260Q3ZCT1 412 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 ACTBL2Q562R1 376 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 KLHDC1Q8N7A1 406 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 TMEM229BQ8NBD8 167 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 TMEM104Q8NE00 496 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 MMP28Q9H239 520 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 SPACA1Q9HBV2 294 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 GLS2Q9UI32 602 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 NUBP2Q9Y5Y2 271 aa14.35□□□□□ -0.11
TRAPPC3-209ENST00000616395 RNASEK-C17orf49H0YIS7 233 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 ANGPTL7O43827 346 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 IRF2P14316 349 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 GABRR1P24046 479 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 PLA2G7Q13093 441 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 KLF9Q13886 244 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 MPPED2Q15777 294 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 DEFB121Q5J5C9 76 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 ELP2Q6IA86 826 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 TRAPPC6BQ86SZ2 158 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 OR10K1Q8NGX5 313 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 PPP1R35Q8TAP8 253 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 CREB3L1Q96BA8 519 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 SEH1LQ96EE3 360 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 Q96M66 194 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 MCUBQ9NWR8 336 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 KLK11Q9UBX7 282 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 HSF4Q9ULV5 492 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 ST3GAL6Q9Y274 331 aa14.34□□□□□ -0.11
TRAPPC3-209ENST00000616395 DNAH9Q9NYC9 4486 aa14.33□□□□□ -0.12
TRAPPC3-209ENST00000616395 RYR2Q92736 4967 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms