RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 LINC00596Q86U02 117 aa12.34□□□□□ -0.43
SMG9-211ENST00000601170 C17orf78Q8N4C9 275 aa12.34□□□□□ -0.43
SMG9-211ENST00000601170 IL22RA1Q8N6P7 574 aa12.34□□□□□ -0.43
SMG9-211ENST00000601170 RIMS4Q9H426 269 aaPredicted RBP12.34□□□□□ -0.43
SMG9-211ENST00000601170 OPA3Q9H6K4 179 aa12.34□□□□□ -0.43
SMG9-211ENST00000601170 ABI3Q9P2A4 366 aa12.34□□□□□ -0.43
SMG9-211ENST00000601170 ZNF407Q9C0G0 2248 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 TRAV24A0A0B4J272 114 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 WRBO00258 174 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 HSPA12AO43301 675 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 WNT5AP41221 380 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 GTF3AQ92664 365 aaKnown RBP12.33□□□□□ -0.44
SMG9-211ENST00000601170 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
SMG9-211ENST00000601170 ESPL1Q14674 2120 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 CHST1O43916 411 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 EPHA1P21709 976 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 F2RP25116 425 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 SULT1A1P50225 295 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 BAXQ07812 192 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 RHEBQ15382 184 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 DCAF10Q5QP82 559 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 SPSB3Q6PJ21 355 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 DBX2Q6ZNG2 339 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 ZNF573Q86YE8 665 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 OR1J1Q8NGS3 322 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 IL22RA2Q969J5 263 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 TAAR3PQ9P1P4 343 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 PRSS50Q9UI38 385 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 MPC1Q9Y5U8 109 aa12.33□□□□□ -0.44
SMG9-211ENST00000601170 DNAJC13O75165 2243 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 A0A1W2PNU3 283 aaPredicted RBP12.32□□□□□ -0.44
SMG9-211ENST00000601170 ARG1P05089 322 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 MMP9P14780 707 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 APLNRP35414 380 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 MEOX2P50222 304 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 GNG3P63215 75 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 HLA-DRB3P79483 266 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 RUNX1Q01196 453 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 ZNF154Q13106 437 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 HIKESHIQ53FT3 197 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 MCEMP1Q8IX19 187 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 FAM58AQ8N1B3 248 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 OR10J5Q8NHC4 309 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 C12orf49Q9H741 205 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 OR2W1Q9Y3N9 320 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 RNF115Q9Y4L5 304 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 TRBV6-6A0A0A6YYG2 114 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 A0A0G2JRQ6 117 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 A0A1W2PPE2 198 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 RBFOX3A6NFN3 312 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 OR5B21A6NL26 309 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 RHBDL1O75783 438 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 RNPS1Q15287 305 aaKnown RBP12.32□□□□□ -0.44
SMG9-211ENST00000601170 IGFBP7Q16270 282 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 SOHLH1Q5JUK2 328 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 ZNF324BQ6AW86 544 aaPredicted RBP12.32□□□□□ -0.44
SMG9-211ENST00000601170 OR8G5Q8NG78 346 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 OR51H1Q8NH63 302 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 SNIP1Q8TAD8 396 aaKnown RBP12.32□□□□□ -0.44
SMG9-211ENST00000601170 GUCD1Q96NT3 240 aa12.32□□□□□ -0.44
SMG9-211ENST00000601170 EIF3GO75821 320 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMG9-211ENST00000601170 AGAP20933 346 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 S100GP29377 79 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 PAX9P55771 341 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 IL24Q13007 206 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 CLN3Q13286 438 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 OR2T2Q6IF00 324 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 ZNF880Q6PDB4 577 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 ZNF561Q8N587 486 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 FAM24BQ8N5W8 94 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 IL1F10Q8WWZ1 152 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 GPR87Q9BY21 358 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 SMDT1Q9H4I9 107 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 DLL3Q9NYJ7 618 aa12.31□□□□□ -0.44
SMG9-211ENST00000601170 ERRFI1Q9UJM3 462 aaPredicted RBP12.31□□□□□ -0.44
SMG9-211ENST00000601170 PUS1Q9Y606 427 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMG9-211ENST00000601170 hCG_1809904A0A1W2PP81 198 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 A0A1W2PR64 198 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 A0A1W2PRV1 198 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 S100A6P06703 90 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 CA6P23280 308 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 MPLP40238 635 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 EIF2S3LQ2VIR3 472 aaKnown RBP12.3□□□□□ -0.44
SMG9-211ENST00000601170 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
SMG9-211ENST00000601170 GNPNAT1Q96EK6 184 aaPredicted RBP12.3□□□□□ -0.44
SMG9-211ENST00000601170 ARRDC1-AS1Q9H2J1 176 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 DOCK7Q96N67 2140 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 AHCTF1Q8WYP5 2266 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 C5orf52A6NGY3 159 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 ARGFXA6NJG6 315 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 H3BP45 60 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 ZNF883P0CG24 379 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 PSG2P11465 335 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 RAB5AP20339 215 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 MEOX1P50221 254 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 SPATA46Q5T0L3 261 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 GPR146Q96CH1 333 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 ATP5SQ99766 215 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 CABLES2Q9BTV7 478 aa12.3□□□□□ -0.44
SMG9-211ENST00000601170 OR1A1Q9P1Q5 309 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms