RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MBNL3Q9NUK0 354 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 TAS2R3Q9NYW6 316 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 AUP1Q9Y679 476 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 A3GALT2U3KPV4 340 aa16.42■□□□□ 0.22
SHKBP1-222ENST00000600320 TRBV6-6A0A0A6YYG2 114 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 ZNF729A6NN14 1252 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 A8MV72 311 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 C15orf65H3BRN8 121 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 M0R1W7 72 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 SSX5O60225 188 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 HLA-DQB1P01920 261 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 CD3GP09693 182 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 SSTR5P35346 364 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 RIPPLY3P57055 190 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 ARL6IP1Q15041 203 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 METTL11BQ5VVY1 283 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 HACD4Q5VWC8 232 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 CNIH2Q6PI25 160 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 GCDHQ92947 438 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 PCGF1Q9BSM1 259 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 MMP27Q9H306 513 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 C12orf4Q9NQ89 552 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 SIRT7Q9NRC8 400 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 CALYQ9NYX4 217 aa16.41■□□□□ 0.22
SHKBP1-222ENST00000600320 A0A1W2PPH5 198 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 TOX4O94842 621 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 MELTFP08582 738 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 OMGP23515 440 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 GUCA2AQ02747 115 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 PNLIPRP3Q17RR3 467 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 PRAMEF5Q5TYX0 476 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 BAIAP2L2Q6UXY1 529 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 VMO1Q7Z5L0 202 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 ZNF565Q8N9K5 539 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 RFESDQ8TAC1 157 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 SETD6Q8TBK2 473 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 Q9N2K0 584 aa16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 MRPS7Q9Y2R9 242 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-222ENST00000600320 KBTBD11-OT1A0A1B0GTJ5 212 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 C12orf77C9JDV5 145 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 NPIPB11E5RHQ5 1161 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 FCGR3AP08637 254 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 TNFSF8P32971 234 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 GNG2P59768 71 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 UTF1Q5T230 341 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 ZNF782Q6ZMW2 699 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 IL17RELQ6ZVW7 336 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 MAFIPQ8WZ33 124 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 TNFRSF14Q92956 283 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 UPRTQ96BW1 309 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 GAL3ST2Q9H3Q3 398 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 RIMS4Q9H426 269 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 ZNF230Q9UIE0 474 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 ADAM30Q9UKF2 790 aa16.39■□□□□ 0.21
SHKBP1-222ENST00000600320 ORC5O43913 435 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 CLPXO76031 633 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 IGHV1-8P0DP01 117 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 PRTN3P24158 256 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 MNDAP41218 407 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 KLRD1Q13241 179 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 HMGN3Q15651 99 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 KLF17Q5JT82 389 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 C6orf183Q5T699 404 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 HCP5Q6MZN7 132 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 FAM53AQ6NSI3 398 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 C1orf122Q6ZSJ8 110 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 SNX29P2Q8IUI4 249 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 OR1L1Q8NH94 360 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 ARL11Q969Q4 196 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 DIRAS2Q96HU8 199 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 LINC00574Q9H8X3 128 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 TAF9BQ9HBM6 251 aa16.38■□□□□ 0.21
SHKBP1-222ENST00000600320 ZANQ9Y493 2812 aa16.37■□□□□ 0.21
SHKBP1-222ENST00000600320 GZMHP20718 246 aa16.37■□□□□ 0.21
SHKBP1-222ENST00000600320 MRPS15P82914 257 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-222ENST00000600320 LTC4SQ16873 150 aa16.37■□□□□ 0.21
SHKBP1-222ENST00000600320 FAM120AOSQ5T036 256 aa16.37■□□□□ 0.21
SHKBP1-222ENST00000600320 HEPN1Q6WQI6 88 aa16.37■□□□□ 0.21
SHKBP1-222ENST00000600320 OR6Q1Q8NGQ2 317 aa16.37■□□□□ 0.21
SHKBP1-222ENST00000600320 METTL8Q9H825 291 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-222ENST00000600320 IDI2-AS1Q9NZ38 188 aa16.37■□□□□ 0.21
SHKBP1-222ENST00000600320 SESN1Q9Y6P5 492 aa16.37■□□□□ 0.21
SHKBP1-222ENST00000600320 IGHV3OR16-10A0A075B7F0 116 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 IGKV1D-8A0A087WSZ0 117 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 MEIOCA2RUB1 952 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 RNASEK-C17orf49H0YIS7 233 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 FSHBP01225 129 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 HBZP02008 142 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 RBP4P02753 201 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 HOXB4P17483 251 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 TALDO1P37837 337 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 HLA-DRB3P79483 266 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 PITPNAQ00169 270 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 MOB1BQ7L9L4 216 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 PDZD9Q8IXQ8 264 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 LHX4Q969G2 390 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 KIRREL1Q96J84 757 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 ABHD1Q96SE0 405 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 UNKLQ9H9P5 680 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 TMEM160Q9NX00 188 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms