RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PRIMA1Q86XR5 153 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 LYSMD2Q8IV50 215 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 SETD6Q8TBK2 473 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 DCTN5Q9BTE1 182 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 SSBP3Q9BWW4 388 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 C19orf12Q9NSK7 152 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 OR6C3Q9NZP0 311 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 KIAA2026Q5HYC2 2103 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 IGKV1D-8A0A087WSZ0 117 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TRBV23-1A0A0A0MS06 115 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 hADV38S2A0JD32 116 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 KIAA1324LA8MWY0 1029 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 PHF1O43189 567 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 LY6G6DO95868 133 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 GZMHP20718 246 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ZFP36P26651 326 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 IL2RGP31785 369 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 RCVRNP35243 200 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 RPL31P62899 125 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 CD276Q5ZPR3 534 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TMEM200BQ69YZ2 307 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ZNF565Q8N9K5 539 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 LY6G5BQ8NDX9 201 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 OR13A1Q8NGR1 328 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 C8orf46Q8TAG6 207 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 MAFIPQ8WZ33 124 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 H1FXQ92522 213 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TRIM63Q969Q1 353 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 Q96MF0 132 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 MDFIQ99750 246 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 REG4Q9BYZ8 158 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 IFT46Q9NQC8 304 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ZNF107Q9UII5 783 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 MGAT4AQ9UM21 535 aa13.5□□□□□ -0.25
CDK5RAP3-228ENST00000583363 LOC105371242A0A075B767 164 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 A8MXK9 166 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TRDCB7Z8K6 153 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 FCER2P06734 321 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 GSTT2BP0CG30 244 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 IL7P13232 177 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ACTBP60709 375 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ACTG1P63261 375 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 LOXL1Q08397 574 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 MOB1BQ7L9L4 216 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TCF23Q7RTU1 214 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 C5orf24Q7Z6I8 188 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 CIARTQ8N365 385 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TMEM229BQ8NBD8 167 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 BEST4Q8NFU0 473 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 MRGPRDQ8TDS7 321 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 SNAPC3Q92966 411 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ZNF286AQ9HBT8 521 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 KCNIP1Q9NZI2 227 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 LPAR3Q9UBY5 353 aa13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 RPUSD1Q9UJJ7 312 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 UBE2J1Q9Y385 318 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-228ENST00000583363 DSCAML1Q8TD84 2053 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TRGV10A0A0A0MS01 117 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 C22orf46C9J442 243 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 FAM157AC9JC47 383 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 FOXH1O75593 365 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 UPK1BO75841 260 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 SCTP09683 121 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 GSTT2P0CG29 244 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 IFITM3Q01628 133 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 HMGN3Q15651 99 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 C6orf183Q5T699 404 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TRIQKQ629K1 86 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 OR52W1Q6IF63 320 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TRAT1Q6PIZ9 186 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ZNF554Q86TJ5 538 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 BORCS5Q969J3 196 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 C1orf159Q96HA4 380 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 COX4I2Q96KJ9 171 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TAF9BQ9HBM6 251 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TAS2R8Q9NYW2 309 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TAS2R3Q9NYW6 316 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 OPN4Q9UHM6 478 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ANXA10Q9UJ72 324 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 POLR3KQ9Y2Y1 108 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 LINC00312Q9Y6C7 94 aa13.48□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TLN2Q9Y4G6 2542 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 KIR2DS1A0A191URI9 304 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ANKRD20A5PA0PJZ0 165 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 MEX3AA1L020 520 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 C12orf77C9JDV5 145 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 RNF223E7ERA6 249 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 C15orf65H3BRN8 121 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 CSF1P09603 554 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 HLA-DMAP28067 261 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 GLP1RP43220 463 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 KIR2DS4P43632 304 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 HLA-DRB3P79483 266 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 KLF9Q13886 244 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ZNF273Q14593 569 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 KIR2DS1Q14954 304 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 C17orf58Q2M2W7 97 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 FAM185AQ8N0U4 392 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 DMRTB1Q96MA1 342 aa13.47□□□□□ -0.25
CDK5RAP3-228ENST00000583363 LINC00574Q9H8X3 128 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms