RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 MMDQ15546 238 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 DEFB107AQ8IZN7 70 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 PRSS35Q8N3Z0 413 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 UBALD1Q8TB05 177 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 SPSB1Q96BD6 273 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 NCOR1P1Q9H4R4 102 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 RHOFQ9HBH0 211 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 SLC25A19Q9HC21 320 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 FAM118AQ9NWS6 357 aa12.48□□□□□ -0.41
CTDNEP1-211ENST00000575783 TRAV24A0A0B4J272 114 aa12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 GNGT2O14610 69 aa12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 PRKYO43930 277 aa12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 IGHV3-11P01762 117 aa12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 TMEM225BP0DP42 221 aa12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 RSBN1Q5VWQ0 802 aaPredicted RBP12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 UTS2BQ765I0 119 aa12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 HS3ST5Q8IZT8 346 aa12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 PLPPR1Q8TBJ4 325 aa12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 MBOAT4Q96T53 435 aa12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 HIPK2Q9H2X6 1198 aa12.47□□□□□ -0.41
CTDNEP1-211ENST00000575783 METTL15A6NJ78 407 aa12.46□□□□□ -0.41
CTDNEP1-211ENST00000575783 SDCBPO00560 298 aaPredicted RBP12.46□□□□□ -0.41
CTDNEP1-211ENST00000575783 HSPB1P04792 205 aaKnown RBP12.46□□□□□ -0.41
CTDNEP1-211ENST00000575783 GK3PQ14409 553 aa12.46□□□□□ -0.41
CTDNEP1-211ENST00000575783 RNLSQ5VYX0 342 aa12.46□□□□□ -0.41
CTDNEP1-211ENST00000575783 SAXO1Q8IYX7 474 aa12.46□□□□□ -0.41
CTDNEP1-211ENST00000575783 LINC00311Q8N616 119 aa12.46□□□□□ -0.41
CTDNEP1-211ENST00000575783 MINDY2Q8NBR6 621 aa12.46□□□□□ -0.41
CTDNEP1-211ENST00000575783 CNIH3Q8TBE1 160 aa12.46□□□□□ -0.41
CTDNEP1-211ENST00000575783 FLYWCH2Q96CP2 140 aaKnown RBP12.46□□□□□ -0.41
CTDNEP1-211ENST00000575783 HECTD4Q9Y4D8 3996 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 IGHV3-43A0A0B4J1X8 118 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 A0A1W2PN81 502 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 M0R129 80 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 UBCP0CG48 685 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 IGHV3-43DP0DP04 118 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 FSTP19883 344 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 BLVRBP30043 206 aaPredicted RBP12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 CHRNA7P36544 502 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 ECSCRQ19T08 205 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 SPATS1Q496A3 300 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 GTSCR1Q86UQ5 136 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 DHFR2Q86XF0 187 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 OR13C9Q8NGT0 318 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 ARL11Q969Q4 196 aa12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 UTP4Q969X6 686 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-211ENST00000575783 IGHV7-81A0A0B4J1V7 117 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 A0A1W2PQL4 384 aaPredicted RBP12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 SLC31A2O15432 143 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 SOX15O60248 233 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 APOL3O95236 402 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 BRI3O95415 125 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 RAP2AP10114 183 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 GZMHP20718 246 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 RPP25LQ8N5L8 163 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 RITA1Q96K30 269 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 ANKRD60Q9BZ19 345 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 ERGIC3Q9Y282 383 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 CEPT1Q9Y6K0 416 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 A3GALT2U3KPV4 340 aa12.44□□□□□ -0.42
CTDNEP1-211ENST00000575783 H0Y980 276 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 TXNL1O43396 289 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 HLA-DRB1P01911 266 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 DBTP11182 482 aaKnown RBP12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 VHLP40337 213 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 CRISP1P54107 249 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 AADACL4Q5VUY2 407 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 TMEM244Q5VVB8 128 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 LIN54Q6MZP7 749 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 TCEANCQ8N8B7 351 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 C8orf31Q8N9H6 132 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 OR52M1Q8NGK5 317 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 CCDC107Q8WV48 283 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 MS4A10Q96PG2 267 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 ELAC2Q9BQ52 826 aaKnown RBP12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 ST6GALNAC5Q9BVH7 336 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 GFOD1Q9NXC2 390 aa12.43□□□□□ -0.42
CTDNEP1-211ENST00000575783 TNCP24821 2201 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 SULT1C4O75897 302 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 ANXA8P13928 327 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 ACTBP60709 375 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 PTGES3Q15185 160 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 ZSCAN26Q16670 478 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 NXNL2Q5VZ03 156 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 SLC25A48Q6ZT89 311 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 OR10H4Q8NGA5 316 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 OR10AC1Q8NH08 325 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 NABP2Q9BQ15 211 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 ZNF251Q9BRH9 671 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 GNG8Q9UK08 70 aa12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 FOXA2Q9Y261 457 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-211ENST00000575783 C15orf65H3BRN8 121 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 RGS11O94810 467 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 MT-ND2P03891 347 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 OR2T7P0C7T2 308 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 KCNJ3P48549 501 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 MNAT1P51948 309 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 MS4A2Q01362 244 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 LSAMPQ13449 338 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 KISS1Q15726 138 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms