RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 FAM27D1Q5T7N8 215 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 TOX2Q96NM4 488 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 GPR27Q9NS67 375 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 OPN4Q9UHM6 478 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 OR51B2Q9Y5P1 312 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 ANKRD20A5PA0PJZ0 165 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 SURF2Q15527 256 aaPredicted RBP12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 WDFY2Q96P53 400 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 DDA1Q9BW61 102 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 NEU3Q9UQ49 428 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 NUP214P35658 2090 aaPredicted RBP12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 FAM90A27PA6NNH2 459 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 FTH1P19P0C7X4 201 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 PYCR3Q53H96 274 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 TCF23Q7RTU1 214 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 ANKRD37Q7Z713 158 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 RARRES2Q99969 163 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 NRIP2Q9BQI9 281 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 A1L4Q6 167 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 RPS27P42677 84 aaKnown RBP12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 GFRA1P56159 465 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 ECSCRQ19T08 205 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 MORN1Q5T089 497 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 HARBI1Q96MB7 349 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 ANAPC13Q9BS18 74 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 KCNE5Q9UJ90 142 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 CCDC144NLQ6NUI1 221 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 SLC23A3Q6PIS1 610 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 GMLQ99445 158 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 RCC2Q9P258 522 aaKnown RBP12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 FCMRO60667 390 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 PSG9Q00887 426 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 FAM53BQ14153 422 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 WDR38Q5JTN6 314 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 H1FOOQ8IZA3 346 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 ZBTB34Q8NCN2 500 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 OR11G2Q8NGC1 345 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 OR5AC2Q9NZP5 309 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 CA1P00915 261 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 VDAC1P21796 283 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 DMRTC1Q5HYR2 192 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 GPR82Q96P67 336 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 SPAG17Q6Q759 2223 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 PLAUP00749 431 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 FAM209BQ5JX69 171 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 Q5PR19 223 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 FBXO46Q6PJ61 603 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 TEX29Q8N6K0 151 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 NUBPLQ8TB37 319 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 MRPL18Q9H0U6 180 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 HEXA-AS1Q9H8Q6 139 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 TBC1D29Q9UFV1 150 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 COL14A1Q05707 1796 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 CTDSPLO15194 276 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 HYPMO75409 117 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 AGERQ15109 404 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 PGLYRP4Q96LB8 373 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 MARVELD1Q9BSK0 173 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 HSPB7Q9UBY9 170 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 KCNK7Q9Y2U2 307 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 EIF3IQ13347 325 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 SAPCD1Q5SSQ6 148 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 OTPQ5XKR4 325 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 DMRTA2Q96SC8 542 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 TRBV9A0A0B4J1U6 114 aa12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 PTCRAQ6ISU1 281 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P12-202ENST00000559989 TRGC1P0CF51 173 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 LAMTOR1Q6IAA8 161 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 OR4D5Q8NGN0 318 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 OR4A5Q8NH83 315 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 DNASE2BQ8WZ79 361 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 C10orf35Q96D05 121 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 GMPPAQ96IJ6 420 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 TMEM56-RWDD3S4R434 201 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 TMEM131LA2VDJ0 1609 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 TRBV23-1A0A0A0MS06 115 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 CD3EP07766 207 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 MPLP40238 635 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 EWSR1Q01844 656 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 FZD5Q13467 585 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 MPC1Q9Y5U8 109 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 CNTRLQ7Z7A1 2325 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 A0A1B0GWB2 263 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 THAP10Q9P2Z0 257 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 MYO16Q9Y6X6 1858 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 IGKV3OR2-268A0A0C4DH90 116 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 ANOS1P23352 680 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 PSG6Q00889 435 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 ORAI1Q96D31 301 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 SOD3P08294 240 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 BHLHA15Q7RTS1 189 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 OR8G5Q8NG78 346 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 FGF14Q92915 247 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 DIRC2Q96SL1 478 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 PKIBQ9C010 78 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 TCRBV5S2A0A599 114 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 H3BRM9 83 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 NXPH1P58417 271 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms