RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 SLC25A15Q9Y619 301 aa8.55□□□□□ -1.04
TMEM260-211ENST00000556648 OR5H1A6NKK0 313 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 A6NLC8 198 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 HAX1O00165 279 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 ADAM20O43506 726 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 PGLYRP1O75594 196 aaPredicted RBP8.54□□□□□ -1.04
TMEM260-211ENST00000556648 ASCL1P50553 236 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF83P51522 516 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 AKR1C2P52895 323 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 SRSF3P84103 164 aaKnown RBP8.54□□□□□ -1.04
TMEM260-211ENST00000556648 AKR1C1Q04828 323 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF146Q15072 292 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 TESK1Q15569 626 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 LRP11Q86VZ4 500 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 Q8IYB0 196 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 OR10J5Q8NHC4 309 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 SUN5Q8TC36 379 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 TMEM56Q96MV1 263 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 ESRP2Q9H6T0 727 aaKnown RBP8.54□□□□□ -1.04
TMEM260-211ENST00000556648 METRNQ9UJH8 293 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 ERRFI1Q9UJM3 462 aaPredicted RBP8.54□□□□□ -1.04
TMEM260-211ENST00000556648 TMEM56-RWDD3S4R434 201 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 GTF3C1Q12789 2109 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 SVILO95425 2214 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 A0A0G2JRQ6 117 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 TMEM210A6NLX4 147 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 PROB1E7EW31 1015 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 FBXO24O75426 580 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 IGLV2-14P01704 120 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 CTXN2P0C2S0 81 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 KITLGP21583 273 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 UCP1P25874 307 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 LPAR6P43657 344 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 ARHGDIBP52566 201 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 C1orf185Q5T7R7 199 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 ATRAIDQ6UW56 229 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF695Q8IW36 515 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 OR51H1Q8NH63 302 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 S100PBPQ96BU1 408 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 MAGT1Q9H0U3 335 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 CXXC4Q9H2H0 198 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 C11orf1Q9H5F2 150 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 TAF9BQ9HBM6 251 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 TRAPPC2LQ9UL33 140 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 OR2W1Q9Y3N9 320 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 TMED3Q9Y3Q3 217 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 POMT1Q9Y6A1 747 aa8.54□□□□□ -1.04
TMEM260-211ENST00000556648 A0A1B0GW55 424 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 MEX3AA1L020 520 aaKnown RBP8.53□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF705EA8MWA4 302 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-211ENST00000556648 KRBOX1C9JBD0 128 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 E5RGE8 158 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 SH2D1BO14796 132 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 GPR137BO60478 399 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 PTBP3O95758 552 aaKnown RBP8.53□□□□□ -1.04
TMEM260-211ENST00000556648 HOXD4P09016 255 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-211ENST00000556648 DUX4L2P0CJ85 424 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 DUX4L3P0CJ86 424 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 DUX4L4P0CJ87 422 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 DUX4L5P0CJ88 424 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 DUX4L6P0CJ89 424 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 DUX4L7P0CJ90 424 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 MDH2P40926 338 aaKnown RBP8.53□□□□□ -1.04
TMEM260-211ENST00000556648 ID4P47928 161 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 POLR2GP62487 172 aaKnown RBP eCLIP8.53□□□□□ -1.04
TMEM260-211ENST00000556648 P2RY6Q15077 328 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 IZUMO4Q1ZYL8 232 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 SPRNQ5BIV9 151 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 CXorf66Q5JRM2 361 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-211ENST00000556648 WDR82Q6UXN9 313 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 OR1L1Q8NH94 360 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 RNF141Q8WVD5 230 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 RHOFQ9HBH0 211 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 DUX4Q9UBX2 424 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 WASF3Q9UPY6 502 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 NSG2Q9Y328 171 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 H0Y980 276 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 M0R1B8 84 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 ST8SIA3O43173 380 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 SSSCA1O60232 199 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 CDS2O95674 445 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 PSG2P11465 335 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 EGR1P18146 543 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 SRPXP78539 464 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 NHLH2Q02577 135 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 HMGN3Q15651 99 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 NMSQ5H8A3 153 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 ACP7Q6ZNF0 438 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 OR10V1Q8NGI7 309 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 SNIP1Q8TAD8 396 aaKnown RBP8.53□□□□□ -1.04
TMEM260-211ENST00000556648 MARC2Q969Z3 335 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 DNTTIP1Q9H147 329 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 TMEM231Q9H6L2 316 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 PLEKHA2Q9HB19 425 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 TAAR3PQ9P1P4 343 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 LPAR3Q9UBY5 353 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 PPP1R3CQ9UQK1 317 aa8.53□□□□□ -1.04
TMEM260-211ENST00000556648 PRRC2CQ9Y520 2896 aaKnown RBP8.52□□□□□ -1.05
TMEM260-211ENST00000556648 ZFHX2Q9C0A1 2572 aaPredicted RBP8.52□□□□□ -1.05
TMEM260-211ENST00000556648 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms