RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 HIST1H2AAQ96QV6 131 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 NAT8Q9UHE5 227 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 WASF3Q9UPY6 502 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 LAMP3Q9UQV4 416 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 CNOT4O95628 575 aaKnown RBP12.19□□□□□ -0.46
SRP54-202ENST00000546080 CD55P08174 381 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 MYF5P13349 255 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 APLNRP35414 380 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 NUTF2P61970 127 aaKnown RBP12.19□□□□□ -0.46
SRP54-202ENST00000546080 SLC10A1Q14973 349 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 RAET1LQ5VY80 246 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 WDR25Q64LD2 544 aaPredicted RBP12.19□□□□□ -0.46
SRP54-202ENST00000546080 SLC25A26Q70HW3 274 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 SSX7Q7RTT5 188 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 CALHM1Q8IU99 346 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 GPR137CQ8N3F9 429 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 RAB40CQ96S21 281 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 SMIM7Q9BQ49 75 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 DEFB126Q9BYW3 111 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 OR14J1Q9UGF5 321 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 ZNF391Q9UJN7 358 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 hCG_38984A0A1B0GV85 526 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 PPP5D1E7EU14 171 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 P2RY6Q15077 328 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 OR5B12Q96R08 314 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 PSMG3Q9BT73 122 aaPredicted RBP12.18□□□□□ -0.46
SRP54-202ENST00000546080 RBKSQ9H477 322 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 A0A0G2JRQ6 117 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 ZNF816-ZNF321PA0A0X1KG74 233 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 TP53I11O14683 189 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 PFN1P07737 140 aaKnown RBP12.18□□□□□ -0.46
SRP54-202ENST00000546080 CST2P09228 141 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 MDH2P40926 338 aaKnown RBP12.18□□□□□ -0.46
SRP54-202ENST00000546080 ERVS71-1P61550 626 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 ZNF92Q03936 586 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 DAZAP2Q15038 168 aaPredicted RBP12.18□□□□□ -0.46
SRP54-202ENST00000546080 COA6Q5JTJ3 125 aaKnown RBP12.18□□□□□ -0.46
SRP54-202ENST00000546080 ABLIM2Q6H8Q1 611 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 ZNF66Q6ZN08 573 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 TGIF2LYQ8IUE0 185 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 GPR146Q96CH1 333 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 PYGO2Q9BRQ0 406 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 IER2Q9BTL4 223 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 MRPL37Q9BZE1 423 aaKnown RBP12.18□□□□□ -0.46
SRP54-202ENST00000546080 PLK3Q9H4B4 646 aa12.18□□□□□ -0.46
SRP54-202ENST00000546080 CHCHD2Q9Y6H1 151 aaPredicted RBP12.18□□□□□ -0.46
SRP54-202ENST00000546080 MAP1LC3B2A6NCE7 125 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 PGLYRP1O75594 196 aaPredicted RBP12.17□□□□□ -0.46
SRP54-202ENST00000546080 TUSC2O75896 110 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 PIAS2O75928 621 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 PATE4P0C8F1 98 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 ZNF32P17041 273 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 S100GP29377 79 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 GALR1P47211 349 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 HERPUD1Q15011 391 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 SRSF7Q16629 238 aaKnown RBP eCLIP12.17□□□□□ -0.46
SRP54-202ENST00000546080 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
SRP54-202ENST00000546080 CYP2G1PQ6ZSU1 146 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 ZNF295-AS1Q8N0V1 137 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 ZIC4Q8N9L1 334 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 TSTD1Q8NFU3 115 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 ACY3Q96HD9 319 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 TECTBQ96PL2 329 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 MAP1LC3BQ9GZQ8 125 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 PRSS50Q9UI38 385 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 SHANK1Q9Y566 2161 aa12.17□□□□□ -0.46
SRP54-202ENST00000546080 KIR2DS1A0A191URI9 304 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 OR6C6A6NF89 314 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 H7BYZ3 331 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 ZNF737O75373 536 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 TIAF1O95411 115 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 IL18BPO95998 194 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 GLB1P16278 677 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 KIR2DS4P43632 304 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 IDH3GP51553 393 aaPredicted RBP12.16□□□□□ -0.46
SRP54-202ENST00000546080 SERF2P84101 59 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 TMEM241Q24JQ0 296 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 BSXQ3C1V8 233 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 TMEM41BQ5BJD5 291 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 ZNF525Q8N782 197 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 DNASE2BQ8WZ79 361 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 AGMATQ9BSE5 352 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 ADAMTS20P59510 1910 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 GON4LQ3T8J9 2241 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A10PA6NDY2 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A18PA6NE21 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A16PA6NEW6 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A20PA6NIJ5 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A8PA6NJQ4 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A7PA6NKC0 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A22PA8MWA6 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A12PA8MX19 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A5PA8MXJ8 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A23PA8MXZ1 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 EREGO14944 169 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 DKK1O94907 266 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 SERPINE2P07093 398 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A15PP0C7V4 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 METTL15P1P0C7V9 234 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms