RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 HERV-K104P61576 105 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 ZNF497Q6ZNH5 498 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 KDF1Q8NAX2 398 aaPredicted RBP11.48□□□□□ -0.57
HCFC2-202ENST00000544223 OR1L1Q8NH94 360 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 LHFPL5Q8TAF8 219 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 PRR7Q8TB68 274 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 MRPL24Q96A35 216 aaKnown RBP11.48□□□□□ -0.57
HCFC2-202ENST00000544223 COQ2Q96H96 371 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 RASL12Q9NYN1 266 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 ELOVL5Q9NYP7 299 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 ERRFI1Q9UJM3 462 aaPredicted RBP11.48□□□□□ -0.57
HCFC2-202ENST00000544223 DEFB108AA8MXU0 73 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 IFNA2P01563 188 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 TK1P04183 234 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 PSG2P11465 335 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 SSTR5P35346 364 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 UTF1Q5T230 341 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 LYZL2Q7Z4W2 148 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 MOB3AQ96BX8 217 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 CLEC4MQ9H2X3 399 aaPredicted RBP11.48□□□□□ -0.57
HCFC2-202ENST00000544223 PRORYQ9H606 182 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 TAF9BQ9HBM6 251 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 DNAJB11Q9UBS4 358 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 RNF150Q9ULK6 438 aa11.48□□□□□ -0.57
HCFC2-202ENST00000544223 IGLV3-9A0A075B6K5 115 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 CRYM-AS1A6NIL9 109 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 TPD52L2O43399 206 aaKnown RBP11.47□□□□□ -0.57
HCFC2-202ENST00000544223 CTSDP07339 412 aaPredicted RBP11.47□□□□□ -0.57
HCFC2-202ENST00000544223 OMGP23515 440 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 LINC00205P59089 165 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 TAS2R31P59538 309 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 GNMTQ14749 295 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 SGPP2Q8IWX5 399 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 Q8IYB0 196 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 SHARPINQ9H0F6 387 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 TLNRD1Q9H1K6 362 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 SPACA1Q9HBV2 294 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 GCM1Q9NP62 436 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 TUBD1Q9UJT1 453 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 L7N2F9 121 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 PHF1O43189 567 aaPredicted RBP11.47□□□□□ -0.57
HCFC2-202ENST00000544223 SIAH2O43255 324 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 NXPH3O95157 252 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 OR3A1P47881 315 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 TNFAIP6P98066 277 aaPredicted RBP11.47□□□□□ -0.57
HCFC2-202ENST00000544223 RBM39Q14498 530 aaKnown RBP11.47□□□□□ -0.57
HCFC2-202ENST00000544223 FAHD2BQ6P2I3 314 aaPredicted RBP11.47□□□□□ -0.57
HCFC2-202ENST00000544223 FAHD2AQ96GK7 314 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 ARL6Q9H0F7 186 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 MBD2Q9UBB5 411 aa11.47□□□□□ -0.57
HCFC2-202ENST00000544223 H0YIZ8 118 aa11.46□□□□□ -0.57
HCFC2-202ENST00000544223 HSPA12AO43301 675 aa11.46□□□□□ -0.57
HCFC2-202ENST00000544223 PRDX2P32119 198 aa11.46□□□□□ -0.57
HCFC2-202ENST00000544223 HTR2BP41595 481 aa11.46□□□□□ -0.57
HCFC2-202ENST00000544223 ZNF546Q86UE3 836 aa11.46□□□□□ -0.57
HCFC2-202ENST00000544223 DMRTC2Q8IXT2 367 aaPredicted RBP11.46□□□□□ -0.57
HCFC2-202ENST00000544223 OR52L2PQ8NGH6 319 aa11.46□□□□□ -0.57
HCFC2-202ENST00000544223 OR10J5Q8NHC4 309 aa11.46□□□□□ -0.57
HCFC2-202ENST00000544223 SLC5A7Q9GZV3 580 aa11.46□□□□□ -0.57
HCFC2-202ENST00000544223 DECR2Q9NUI1 292 aa11.46□□□□□ -0.57
HCFC2-202ENST00000544223 RGS13O14921 159 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 PTAFRP25105 342 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 CASP6P55212 293 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 ERVFRD-1P60508 538 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 HLA-DRB3P79483 266 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 LINC00596Q86U02 117 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 TBC1D26Q86UD7 250 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 ST6GALNAC3Q8NDV1 305 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 OR10V1Q8NGI7 309 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 OR13A1Q8NGR1 328 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 OR51H1Q8NH63 302 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 GLYATL2Q8WU03 294 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 OR5AC2Q9NZP5 309 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 WIPI2Q9Y4P8 454 aa11.46□□□□□ -0.58
HCFC2-202ENST00000544223 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.45□□□□□ -0.58
HCFC2-202ENST00000544223 C12orf77C9JDV5 145 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 SCGB1D2O95969 90 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 OR8U9P0C7N5 309 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 CEACAM6P40199 344 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 S100A10P60903 97 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 OPCMLQ14982 345 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 IZUMO4Q1ZYL8 232 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 SMIM21Q3B7S5 101 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 KRBOX4Q5JUW0 171 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 CLEC9AQ6UXN8 241 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 GSG1LQ6UXU4 331 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 GALNT11Q8NCW6 608 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 OR8U1Q8NH10 309 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 SCGB3A2Q96PL1 93 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 NAA60Q9H7X0 242 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 PPP1R3CQ9UQK1 317 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 SRRM5B3KS81 715 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 SHISA9B4DS77 424 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 E7EQL1 145 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 TEX46H3BTG2 121 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 RPA2P15927 270 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 RAB32Q13637 225 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 TEX261Q6UWH6 196 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 TMUB2Q71RG4 321 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 COQ8AQ8NI60 647 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms