RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 HIST1H2BHQ93079 126 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 GPHA2Q96T91 129 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 HIST1H2BNQ99877 126 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 HIST1H2BMQ99879 126 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 ELOA3CA0A087WX78 387 aaPredicted RBP14.22□□□□□ -0.13
CTSB-228ENST00000533455 PGLYRP1O75594 196 aaPredicted RBP14.22□□□□□ -0.13
CTSB-228ENST00000533455 PRDX4Q13162 271 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 DNLZQ5SXM8 178 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 H1FOOQ8IZA3 346 aaPredicted RBP14.22□□□□□ -0.13
CTSB-228ENST00000533455 ZNF295-AS1Q8N0V1 137 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 CPEB3Q8NE35 698 aaKnown RBP14.22□□□□□ -0.13
CTSB-228ENST00000533455 OR2Y1Q8NGV0 311 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 GTF3AQ92664 365 aaKnown RBP14.22□□□□□ -0.13
CTSB-228ENST00000533455 TMEM45BQ96B21 275 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 REPIN1Q9BWE0 567 aaKnown RBP14.22□□□□□ -0.13
CTSB-228ENST00000533455 CISD1Q9NZ45 108 aaKnown RBP14.22□□□□□ -0.13
CTSB-228ENST00000533455 TRBV6-6A0A0A6YYG2 114 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 A0A1B0GU03 582 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 CYTIPO60759 359 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 P04436 131 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 F2RP25116 425 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 RND2P52198 227 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 PNRC1Q12796 327 aaPredicted RBP14.22□□□□□ -0.13
CTSB-228ENST00000533455 FAM90A2PQ658T7 463 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 SPNS3Q6ZMD2 512 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 RAB40CQ96S21 281 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 RIMS4Q9H426 269 aaPredicted RBP14.22□□□□□ -0.13
CTSB-228ENST00000533455 TMEM242Q9NWH2 141 aa14.22□□□□□ -0.13
CTSB-228ENST00000533455 KIAA1324LA8MWY0 1029 aaPredicted RBP14.21□□□□□ -0.13
CTSB-228ENST00000533455 YKT6O15498 198 aa14.21□□□□□ -0.13
CTSB-228ENST00000533455 TGOLN2O43493 480 aa14.21□□□□□ -0.13
CTSB-228ENST00000533455 IFNA5P01569 189 aa14.21□□□□□ -0.13
CTSB-228ENST00000533455 PCSK4Q6UW60 755 aa14.21□□□□□ -0.13
CTSB-228ENST00000533455 GPR146Q96CH1 333 aa14.21□□□□□ -0.13
CTSB-228ENST00000533455 HS3ST6Q96QI5 342 aa14.21□□□□□ -0.13
CTSB-228ENST00000533455 URGCP-MRPS24S4R325 110 aa14.21□□□□□ -0.13
CTSB-228ENST00000533455 SDK2Q58EX2 2172 aa14.21□□□□□ -0.13
CTSB-228ENST00000533455 A0A0G2JRQ6 117 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 LRRC3CA6NJW4 275 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 CYB5BO43169 146 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 CD200P41217 278 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 HAAOP46952 286 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 RPS18P62269 152 aaKnown RBP14.2□□□□□ -0.14
CTSB-228ENST00000533455 CEACAM21Q3KPI0 293 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 ACSF3Q4G176 576 aaPredicted RBP14.2□□□□□ -0.14
CTSB-228ENST00000533455 LINC00596Q86U02 117 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 THNSL2Q86YJ6 484 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 ZDHHC23Q8IYP9 409 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 MRPL30Q8TCC3 161 aaKnown RBP14.2□□□□□ -0.14
CTSB-228ENST00000533455 MTCH1Q9NZJ7 389 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 CCDC163A0A0D9SF12 145 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 NXPH3O95157 252 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 BCL2P10415 239 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 S100GP29377 79 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 MKXQ8IYA7 352 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 HIST3H2BBQ8N257 126 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 MBD3L1Q8WWY6 194 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 PSMG3Q9BT73 122 aaPredicted RBP14.2□□□□□ -0.14
CTSB-228ENST00000533455 PRO3102Q9H379 93 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 CRIM1Q9NZV1 1036 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 IL36RNQ9UBH0 155 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 MRPS18CQ9Y3D5 142 aaKnown RBP14.2□□□□□ -0.14
CTSB-228ENST00000533455 SPEGQ15772 3267 aa14.2□□□□□ -0.14
CTSB-228ENST00000533455 TRAPPC2LH3BP13 241 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 RFPL3SP0C7P2 107 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 GPM6AP51674 278 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 LYSMD4Q5XG99 296 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 ZNF324BQ6AW86 544 aaPredicted RBP14.19□□□□□ -0.14
CTSB-228ENST00000533455 ZNF880Q6PDB4 577 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 P4HA3Q7Z4N8 544 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 C1orf87Q8N0U7 546 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 IFI44Q8TCB0 444 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 NEK7Q8TDX7 302 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 RNF150Q9ULK6 438 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 NOSIPQ9Y314 301 aaKnown RBP14.19□□□□□ -0.14
CTSB-228ENST00000533455 SLC33A1O00400 549 aaPredicted RBP14.19□□□□□ -0.14
CTSB-228ENST00000533455 PPP1R2P9O14990 202 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 TNFSF12O43508 249 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 CYB5R3P00387 301 aaPredicted RBP14.19□□□□□ -0.14
CTSB-228ENST00000533455 TRGC2P03986 189 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 FOLR3P41439 243 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 CXCL12P48061 93 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 NKX6-1P78426 367 aaPredicted RBP14.19□□□□□ -0.14
CTSB-228ENST00000533455 WIPI1Q5MNZ9 446 aaPredicted RBP14.19□□□□□ -0.14
CTSB-228ENST00000533455 ZNF383Q8NA42 475 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 ABHD3Q8WU67 409 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 CLDN23Q96B33 292 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 CABLES2Q9BTV7 478 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 LINC00470Q9BZP3 86 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 PLK3Q9H4B4 646 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 GNG13Q9P2W3 67 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 WNT16Q9UBV4 365 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 OR2W1Q9Y3N9 320 aa14.19□□□□□ -0.14
CTSB-228ENST00000533455 SS18L1O75177 396 aaPredicted RBP14.18□□□□□ -0.14
CTSB-228ENST00000533455 CNOT4O95628 575 aaKnown RBP14.18□□□□□ -0.14
CTSB-228ENST00000533455 COX5BP10606 129 aa14.18□□□□□ -0.14
CTSB-228ENST00000533455 CD81P60033 236 aa14.18□□□□□ -0.14
CTSB-228ENST00000533455 RAB11AP62491 216 aa14.18□□□□□ -0.14
CTSB-228ENST00000533455 TMEM267Q0VDI3 215 aaPredicted RBP14.18□□□□□ -0.14
CTSB-228ENST00000533455 ZNF787Q6DD87 383 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms