RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TNFSF15O95150 251 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 CCL3P10147 92 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 CRYGSP22914 178 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 HAAOP46952 286 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 RAB11AP62491 216 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF92Q03936 586 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 OR2T2Q6IF00 324 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 FOXL2NBQ6ZUU3 175 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 VASH2Q86V25 355 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 FAM185AQ8N0U4 392 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 GAPTQ8N292 157 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 ALKBH3Q96Q83 286 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-208ENST00000527323 IL17BQ9UHF5 180 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 HS3ST3B1Q9Y662 390 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 PCNX1Q96RV3 2341 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 ADAMTS20P59510 1910 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 A0A087WZY1 265 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF587BE7ETH6 402 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST1H2BKO60814 126 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HSPB1P04792 205 aaKnown RBP10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST1H2BJP06899 126 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST1H2BOP23527 126 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST1H2BBP33778 126 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 NPBWR2P48146 333 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 RBM11P57052 281 aaKnown RBP10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST1H2BDP58876 126 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST1H2BCP62807 126 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST2H2BEQ16778 126 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-208ENST00000527323 GPR137CQ8N3F9 429 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 EXTL1Q92935 676 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST1H2BHQ93079 126 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST1H2BNQ99877 126 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HIST1H2BMQ99879 126 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 GFOD1Q9NXC2 390 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 A0A087WWC5 75 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 ZFP92A6NM28 416 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HBE1P02100 147 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 UMODP07911 640 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 HLA-DRB3P79483 266 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF611Q8N823 705 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 RNASE11Q8TAA1 199 aaKnown RBP10.75□□□□□ -0.69
CAPN1-208ENST00000527323 OPA3Q9H6K4 179 aa10.75□□□□□ -0.69
CAPN1-208ENST00000527323 FOXD3Q9UJU5 478 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-208ENST00000527323 ZIC3O60481 467 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 MT-CO3P00414 261 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 IFNA5P01569 189 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 SCTP09683 121 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 GLIPR1P48060 266 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF506Q5JVG8 444 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 ASCL4Q6XD76 172 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 Q6ZPA2 131 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF818PQ6ZRF7 136 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 CALHM1Q8IU99 346 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 RBMXL1Q96E39 390 aaKnown RBP10.74□□□□□ -0.69
CAPN1-208ENST00000527323 SIRT7Q9NRC8 400 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 ADGRG4Q8IZF6 3080 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF732B4DXR9 585 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 TERTO14746 1132 aaKnown RBP10.74□□□□□ -0.69
CAPN1-208ENST00000527323 KLF7O75840 302 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-208ENST00000527323 TMEM50AO95807 157 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 HLA-HP01893 362 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 CCNOP22674 350 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 DSCR4P56555 118 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-208ENST00000527323 PSG4Q00888 419 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 DCAF12Q5T6F0 453 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF468Q5VIY5 522 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF385CQ66K41 422 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-208ENST00000527323 ASCL5Q7RTU5 278 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 AAED1Q7RTV5 226 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 OR8G5Q8NG78 346 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 CLDND2Q8NHS1 167 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 RHOVQ96L33 236 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 SRXN1Q9BYN0 137 aa10.74□□□□□ -0.69
CAPN1-208ENST00000527323 ZNHIT1O43257 154 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 LIFP15018 202 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 FABP4P15090 132 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 ACP1P24666 158 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 CD200P41217 278 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 OR8B8Q15620 311 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 MPV17LQ2QL34 196 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 FAM210BQ96KR6 192 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 TMEM56Q96MV1 263 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 CCL28Q9NRJ3 127 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 TMEM56-RWDD3S4R434 201 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 SOD3P08294 240 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 CST2P09228 141 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 VDAC1P21796 283 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 GPX4P36969 197 aaPredicted RBP10.73□□□□□ -0.69
CAPN1-208ENST00000527323 LCN15Q6UWW0 184 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 STX12Q86Y82 276 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 C11orf1Q9H5F2 150 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 CALHM2Q9HA72 323 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 TMEM38BQ9NVV0 291 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 COL6A6A6NMZ7 2263 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF816-ZNF321PA0A0X1KG74 233 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 CXorf65A6NEN9 183 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 TRGC1P0CF51 173 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 CEACAM16Q2WEN9 425 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 KHDC3LQ587J8 217 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms