RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 FCGR3AP08637 254 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 ZNF735P0CB33 412 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 MUC1P15941 1255 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 NAT1P18440 290 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 PRDX2P32119 198 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 CD80P33681 288 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 ARPC4P59998 168 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 FAM201AQ5SY85 155 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 OR52W1Q6IF63 320 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 DCAF16Q9NXF7 216 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 ZNF230Q9UIE0 474 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 EDARQ9UNE0 448 aa11.8□□□□□ -0.52
PDZRN3-210ENST00000492909 IGKV1D-17A0A075B6S4 117 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 TMEM82A0PJX8 343 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 TMEM178BH3BS89 294 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 B3GALNT1O75752 331 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 AMY2BP19961 511 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 TBPP20226 339 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 S100A11P31949 105 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 MDH2P40926 338 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 TLE4Q04727 773 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 HFEQ30201 348 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 C4orf46Q504U0 113 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 SHEQ5VZ18 495 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 TEX36Q5VZQ5 186 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 TMUB2Q71RG4 321 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 CD177Q8N6Q3 437 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 SUN5Q8TC36 379 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 PCNPQ8WW12 178 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 TINAGL1Q9GZM7 467 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 PPA2Q9H2U2 334 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 RIMS4Q9H426 269 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 CHMP1AQ9HD42 196 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 OOEPA6NGQ2 149 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 I3L521 148 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 PSPNO60542 156 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 ZNF205O95201 554 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 NAPSAO96009 420 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 AMY2AP04746 511 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 OR4E1P0C645 316 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 GABRA2P47869 451 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 UBE2MP61081 183 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 COL10A1Q03692 680 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 RNASE10Q5GAN6 216 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 DCAF12L2Q5VW00 463 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 IDO2Q6ZQW0 420 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 ZNF295-AS1Q8N0V1 137 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 OR4K15Q8NH41 348 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 LRRC20Q8TCA0 184 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 MAFIPQ8WZ33 124 aa11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 TMA7Q9Y2S6 64 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-210ENST00000492909 M0QYG6 137 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 LGALS8O00214 317 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 ARPC5O15511 151 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 RP2O75695 350 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 TFF1P04155 84 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 M6PRP20645 277 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 HRH1P35367 487 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 KCNJ3P48549 501 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 TAS2R46P59540 309 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 MEF2DQ14814 521 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 ACTBL2Q562R1 376 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 STUMQ69YW2 141 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 C12orf45Q8N5I9 185 aaPredicted RBP11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 DEFB108BQ8NET1 73 aa11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 NEU4Q8WWR8 484 aaPredicted RBP11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 ASH1LQ9NR48 2969 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-210ENST00000492909 PPIAL4EA0A075B759 164 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 TRAV38-1A0A0B4J264 116 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 DISC1C4P0D8 188 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 PPIAL4DF5H284 164 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 H7C1Q1 480 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 PPIAL4FP0DN26 164 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 ATXN7L3Q14CW9 347 aaPredicted RBP11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 CHRFAM7AQ494W8 412 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 ATPAF1Q5TC12 328 aaPredicted RBP11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 C17orf107Q6ZR85 190 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 PPP1R35Q8TAP8 253 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 PLPPR1Q8TBJ4 325 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 ZNF286AQ9HBT8 521 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 MED9Q9NWA0 146 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 SLC2A8Q9NY64 477 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 ANXA10Q9UJ72 324 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 METRNQ9UJH8 293 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 NUP50Q9UKX7 468 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 PPIAL4AQ9Y536 164 aa11.77□□□□□ -0.52
PDZRN3-210ENST00000492909 FXYD6-FXYD2A0A087WZ82 144 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 POM121CA8CG34 1229 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 ZNF737O75373 536 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 PMP2P02689 132 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 OR3A1P47881 315 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 SRSF7Q16629 238 aaKnown RBP eCLIP11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 C11orf88Q6PI97 169 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 ZNF497Q6ZNH5 498 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 C20orf204Q6ZNR8 217 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 Q6ZPA2 131 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 ZNF561Q8N587 486 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 OR5AP2Q8NGF4 316 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 OR13C8Q8NGS7 320 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 OR5H2Q8NGV7 314 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms