RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PXT1Q8NFP0 134 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 NDNFQ8TB73 568 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 ZNF714Q96N38 554 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 RHOFQ9HBH0 211 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 FOXJ3Q9UPW0 622 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 LINC00312Q9Y6C7 94 aa8.38□□□□□ -1.07
TTC28-207ENST00000490475 MEGF11A6BM72 1044 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 ODF3BA8MYP8 253 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 DEGS1O15121 323 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 SC5DO75845 299 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 IGHV1-8P0DP01 117 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 VSIG10L2P0DP72 767 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 CCL3L1P16619 93 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 CPEP16870 476 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 SRMP19623 302 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 MAPK3P27361 379 aaPredicted RBP8.37□□□□□ -1.07
TTC28-207ENST00000490475 ERP29P30040 261 aaKnown RBP8.37□□□□□ -1.07
TTC28-207ENST00000490475 NCS1P62166 190 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 MLLT11Q13015 90 aaPredicted RBP8.37□□□□□ -1.07
TTC28-207ENST00000490475 EDDM3AQ14507 147 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 ZNF273Q14593 569 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 GRK1Q15835 563 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 FAM189A2Q15884 450 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 PIGYQ3MUY2 71 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 ARSJQ5FYB0 599 aaPredicted RBP8.37□□□□□ -1.07
TTC28-207ENST00000490475 SPANXN2Q5MJ10 180 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 ELP2Q6IA86 826 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 LRRTM1Q86UE6 522 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 LYPD6Q86Y78 171 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 Q8NFD4 153 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 CAPSLQ8WWF8 208 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 CREB3L1Q96BA8 519 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 CPNE2Q96FN4 548 aaPredicted RBP8.37□□□□□ -1.07
TTC28-207ENST00000490475 METTL9Q9H1A3 318 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 EXOSC4Q9NPD3 245 aaKnown RBP8.37□□□□□ -1.07
TTC28-207ENST00000490475 ZNF581Q9P0T4 197 aa8.37□□□□□ -1.07
TTC28-207ENST00000490475 A0A1W2PP11 408 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 F2RL2O00254 374 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 CCRL2O00421 344 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 MGST3O14880 152 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 UCHL1P09936 223 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 ZNF44P15621 663 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 LMO1P25800 156 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 BRS3P32247 399 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 OR3A1P47881 315 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 MTNR1BP49286 362 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 DLX6P56179 175 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 FABP5Q01469 135 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 IFITM3Q01628 133 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 SSX1Q16384 188 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 SSX2Q16385 188 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 SLC22A6Q4U2R8 563 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 HSD17B12Q53GQ0 312 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 FBLN7Q53RD9 439 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 KPRPQ5T749 579 aaPredicted RBP8.36□□□□□ -1.07
TTC28-207ENST00000490475 GLIPR1L1Q6UWM5 242 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 ZNF782Q6ZMW2 699 aaPredicted RBP8.36□□□□□ -1.07
TTC28-207ENST00000490475 RTN4RL2Q86UN3 420 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 AKAP14Q86UN6 197 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 OR4D6Q8NGJ1 314 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 OR51T1Q8NGJ9 327 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 ZNF596Q8TC21 504 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 PIFOQ8TCI5 191 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 S100A13Q99584 98 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 CLEC7AQ9BXN2 247 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 GAL3ST2Q9H3Q3 398 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 ING3Q9NXR8 418 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 STUB1Q9UNE7 303 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 ST3GAL6Q9Y274 331 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 MRPS28Q9Y2Q9 187 aaKnown RBP8.36□□□□□ -1.07
TTC28-207ENST00000490475 UBE2J1Q9Y385 318 aaPredicted RBP8.36□□□□□ -1.07
TTC28-207ENST00000490475 SESN1Q9Y6P5 492 aa8.36□□□□□ -1.07
TTC28-207ENST00000490475 TRAV24A0A0B4J272 114 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 A6NDX4 124 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 SLC33A1O00400 549 aaPredicted RBP8.35□□□□□ -1.07
TTC28-207ENST00000490475 RGS13O14921 159 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 CSTBP04080 98 aaKnown RBP8.35□□□□□ -1.07
TTC28-207ENST00000490475 SERPINA2P20848 420 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 HTR1DP28221 377 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 CEACAM3P40198 252 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 GLIPR1P48060 266 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 AESQ08117 197 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 BEAN1Q3B7T3 259 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 LHFPL4Q7Z7J7 247 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 CCDC190Q86UF4 302 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 CDH26Q8IXH8 852 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 OSR2Q8N2R0 312 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 THRSPQ92748 146 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 TMEM133Q9H2Q1 129 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 ZNF702PQ9H963 129 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 IL36GQ9NZH8 169 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 SIGLEC9Q9Y336 463 aa8.35□□□□□ -1.07
TTC28-207ENST00000490475 TRGV10A0A0A0MS01 117 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 IGHV2-26A0A0B4J1V2 119 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 M0QZK8 103 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 HSPB6O14558 160 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 GEMIN2O14893 280 aaKnown RBP8.34□□□□□ -1.07
TTC28-207ENST00000490475 CHST1O43916 411 aa8.34□□□□□ -1.07
TTC28-207ENST00000490475 GADD45AP24522 165 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms