RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TRAV41A0A0B4J266 112 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 A0A1W2PQL4 384 aaPredicted RBP8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 GNGT2O14610 69 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 SLC31A2O15432 143 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 HSPA12AO43301 675 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 SOX15O60248 233 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 IGLV1-51P01701 117 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 UBCP0CG48 685 aaKnown RBP8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 IGHV3-43DP0DP04 118 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 ZNF20P17024 532 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 VHLP40337 213 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 CRISP1P54107 249 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 EFNB1P98172 346 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 PITPNAQ00169 270 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 GALEQ14376 348 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 PTGES3Q15185 160 aaKnown RBP8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 SAXO1Q8IYX7 474 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 LINC00311Q8N616 119 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 TCEANCQ8N8B7 351 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 OR13C9Q8NGT0 318 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 OR10AC1Q8NH08 325 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 CNIH3Q8TBE1 160 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 EME1Q96AY2 570 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 RITA1Q96K30 269 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 CHCHD6Q9BRQ6 235 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 BARHL1Q9BZE3 327 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 TAGLN3Q9UI15 199 aa8.34□□□□□ -1.07
SMARCC1-205ENST00000483847 C15orf65H3BRN8 121 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 SDCBPO00560 298 aaPredicted RBP8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 LGALS1P09382 135 aaKnown RBP8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 OCM2P0CE71 109 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 OCMP0CE72 109 aaPredicted RBP8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 TMEM225BP0DP42 221 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 CNTFRP26992 372 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 BLVRBP30043 206 aaPredicted RBP8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 TP53I3Q53FA7 332 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 NXNL2Q5VZ03 156 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 ADGRG5Q8IZF4 528 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 MINDY2Q8NBR6 621 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 OR51A4Q8NGJ6 313 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 IL17DQ8TAD2 202 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 UTP4Q969X6 686 aaKnown RBP8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 IL4I1Q96RQ9 567 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 MBOAT4Q96T53 435 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 RHOFQ9HBH0 211 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 FBXO7Q9Y3I1 522 aa8.33□□□□□ -1.08
SMARCC1-205ENST00000483847 KMT2AQ03164 3969 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 IGHV7-81A0A0B4J1V7 117 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 C12orf77C9JDV5 145 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 SULT1C4O75897 302 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 IGHV3-11P01762 117 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 MT-ND2P03891 347 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 ANXA8P13928 327 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 EPHA2P29317 976 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 NANOS3P60323 173 aaKnown RBP8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 PAX5Q02548 391 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 TRIM25Q14258 630 aaKnown RBP8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 MMDQ15546 238 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 ZSCAN26Q16670 478 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 C19orf54Q5BKX5 351 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 C8orf31Q8N9H6 132 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 OR10H4Q8NGA5 316 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 TMEM163Q8TC26 289 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 RSRP1Q9BUV0 290 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 HIPK2Q9H2X6 1198 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 GFOD1Q9NXC2 390 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 FRRS1LQ9P0K9 344 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 H2AFY2Q9P0M6 372 aaPredicted RBP8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 GNG8Q9UK08 70 aa8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 MRPS28Q9Y2Q9 187 aaKnown RBP8.32□□□□□ -1.08
SMARCC1-205ENST00000483847 LY6G6CO95867 125 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 HLA-DRB1P01911 266 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 OR2T7P0C7T2 308 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 IL3RAP26951 378 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 ZNF134P52741 427 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 NDPQ00604 133 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 ZNF85Q03923 595 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 KISS1Q15726 138 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 ECSCRQ19T08 205 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 PIGYQ3MUY2 71 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 TMEM244Q5VVB8 128 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 ELP2Q6IA86 826 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 SLC25A48Q6ZT89 311 aaKnown RBP8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 ANKRD13BQ86YJ7 626 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 ZNF439Q8NDP4 499 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 OR52M1Q8NGK5 317 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 OR10K1Q8NGX5 313 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 OR2G2Q8NGZ5 317 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 CANT1Q8WVQ1 401 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 ARL11Q969Q4 196 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 NABP2Q9BQ15 211 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 TMED9Q9BVK6 235 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 ANKRD60Q9BZ19 345 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 FAM107BQ9H098 131 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 FAM118AQ9NWS6 357 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 CHCHD3Q9NX63 227 aaKnown RBP8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 NDE1Q9NXR1 346 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 STUB1Q9UNE7 303 aa8.31□□□□□ -1.08
SMARCC1-205ENST00000483847 A0A1W2PN81 502 aa8.3□□□□□ -1.08
SMARCC1-205ENST00000483847 SLC25A17O43808 307 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms