RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 DTX3Q8N9I9 347 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 CCDC107Q8WV48 283 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 TNFRSF14Q92956 283 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 PHF21AQ96BD5 680 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 CMSS1Q9BQ75 279 aaKnown RBP16.35■□□□□ 0.21
ACTB-210ENST00000477812 C6orf62Q9GZU0 229 aaPredicted RBP16.35■□□□□ 0.21
ACTB-210ENST00000477812 RIMS4Q9H426 269 aaPredicted RBP16.35■□□□□ 0.21
ACTB-210ENST00000477812 AUNIPQ9H7T9 357 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 KBTBD11-OT1A0A1B0GTJ5 212 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 ZNF729A6NN14 1252 aaPredicted RBP16.34■□□□□ 0.21
ACTB-210ENST00000477812 POM121CA8CG34 1229 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 NPIPB11E5RHQ5 1161 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 SSX5O60225 188 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 TOX4O94842 621 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 SSTR5P35346 364 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 DLX1P56177 255 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 TAS2R20P59543 309 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 PNLIPRP3Q17RR3 467 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 TMEM69Q5SWH9 247 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 METTL11BQ5VVY1 283 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 ZNF565Q8N9K5 539 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 MMP27Q9H306 513 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 GAL3ST2Q9H3Q3 398 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 METTL8Q9H825 291 aaKnown RBP16.34■□□□□ 0.21
ACTB-210ENST00000477812 CALYQ9NYX4 217 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 TRAPPC2LQ9UL33 140 aa16.34■□□□□ 0.21
ACTB-210ENST00000477812 FN1P02751 2386 aaKnown RBP16.34■□□□□ 0.21
ACTB-210ENST00000477812 C12orf77C9JDV5 145 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 RGS5O15539 181 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 MMP23AO75900 390 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 CLPXO76031 633 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 HLA-DQB1P01920 261 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 FCGR3AP08637 254 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 PRTN3P24158 256 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 GDNFP39905 211 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 MNDAP41218 407 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 KLF17Q5JT82 389 aaPredicted RBP16.33■□□□□ 0.2
ACTB-210ENST00000477812 FAM120AOSQ5T036 256 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 HEPN1Q6WQI6 88 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 VMO1Q7Z5L0 202 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 ZNF554Q86TJ5 538 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 NUDCD2Q8WVJ2 157 aa16.33■□□□□ 0.2
ACTB-210ENST00000477812 ORC5O43913 435 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 CD3GP09693 182 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 IGHV1-8P0DP01 117 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 PTHLHP12272 177 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 GZMHP20718 246 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 HMGN3Q15651 99 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 CNPY1Q3B7I2 92 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 C6orf183Q5T699 404 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 PRAMEF5Q5TYX0 476 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 HCP5Q6MZN7 132 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 CNIH2Q6PI25 160 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 Q71RC1 249 aaPredicted RBP16.32■□□□□ 0.2
ACTB-210ENST00000477812 MOB1BQ7L9L4 216 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 PCGF1Q9BSM1 259 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 Q9N2K0 584 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 SIRT7Q9NRC8 400 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 EXTL2Q9UBQ6 330 aa16.32■□□□□ 0.2
ACTB-210ENST00000477812 FAM25AB3EWG3 89 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 FAM25CB3EWG5 89 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 FAM25GB3EWG6 89 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 OMGP23515 440 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 DTYMKP23919 212 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 PRB3Q04118 309 aaPredicted RBP16.31■□□□□ 0.2
ACTB-210ENST00000477812 ARFRP1Q13795 201 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 TRAT1Q6PIZ9 186 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 BAIAP2L2Q6UXY1 529 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 C5orf24Q7Z6I8 188 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 KIRREL1Q96J84 757 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 TAF9BQ9HBM6 251 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 CHMP1AQ9HD42 196 aaPredicted RBP16.31■□□□□ 0.2
ACTB-210ENST00000477812 ADAM30Q9UKF2 790 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 SESN1Q9Y6P5 492 aa16.31■□□□□ 0.2
ACTB-210ENST00000477812 hCG_1809904A0A1W2PP81 198 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 A0A1W2PPE2 198 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 A0A1W2PR64 198 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 A0A1W2PRV1 198 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 RNASEK-C17orf49H0YIS7 233 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 F2RL2O00254 374 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 TPPPO94811 219 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 HOXB4P17483 251 aaPredicted RBP16.3■□□□□ 0.2
ACTB-210ENST00000477812 TNFSF8P32971 234 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 GNG2P59768 71 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 PITPNAQ00169 270 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 UTF1Q5T230 341 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 ZNF782Q6ZMW2 699 aaPredicted RBP16.3■□□□□ 0.2
ACTB-210ENST00000477812 Q6ZS49 121 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 RFESDQ8TAC1 157 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 UBALD1Q8TB05 177 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 GCDHQ92947 438 aaPredicted RBP16.3■□□□□ 0.2
ACTB-210ENST00000477812 ARL11Q969Q4 196 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 SOSTQ9BQB4 213 aa16.3■□□□□ 0.2
ACTB-210ENST00000477812 NAV3Q8IVL0 2385 aa16.29■□□□□ 0.2
ACTB-210ENST00000477812 A0A087X0M5 115 aa16.29■□□□□ 0.2
ACTB-210ENST00000477812 A0A1B0GX30 115 aa16.29■□□□□ 0.2
ACTB-210ENST00000477812 HBZP02008 142 aa16.29■□□□□ 0.2
ACTB-210ENST00000477812 IGHV4-38-2P0DP08 117 aa16.29■□□□□ 0.2
ACTB-210ENST00000477812 LOXL3P58215 753 aa16.29■□□□□ 0.2
ACTB-210ENST00000477812 GUCA2AQ02747 115 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms