RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 DMKNQ6E0U4 476 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-207ENST00000475549 LAIR2Q6ISS4 152 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 C11orf87Q6NUJ2 197 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 SLC16A12Q6ZSM3 486 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 C8orf86Q6ZUL3 223 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 OR2W3Q7Z3T1 314 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 LYPD6Q86Y78 171 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 PQLC1Q8N2U9 271 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 TMEM104Q8NE00 496 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 OR10A7Q8NGE5 316 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 OR4X2Q8NGF9 303 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 OR52N1Q8NH53 320 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 HAVCR2Q8TDQ0 301 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 GPR148Q8TDV2 347 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 CCDC107Q8WV48 283 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 GHSRQ92847 366 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 TOMM40LQ969M1 308 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 RCC1LQ96I51 464 aaKnown RBP5.53□□□□□ -1.52
HDAC3-207ENST00000475549 EAF1Q96JC9 268 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-207ENST00000475549 PGLYRP3Q96LB9 341 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 DUX3Q96PT4 197 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 GPER1Q99527 375 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 P2RX4Q99571 388 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 FAM192AQ9GZU8 254 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 TMEM138Q9NPI0 162 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 IL36GQ9NZH8 169 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-207ENST00000475549 ING4Q9UNL4 249 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 MOB4Q9Y3A3 225 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 HSPE1-MOB4S4R3N1 261 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 RYR3Q15413 4870 aa5.53□□□□□ -1.52
HDAC3-207ENST00000475549 IGHV3-43A0A0B4J1X8 118 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 SERPINE3A8MV23 424 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 C12orf77C9JDV5 145 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 CCRL2O00421 344 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 HSD17B6O14756 317 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 MAGEB3O15480 346 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 FGF16O43320 207 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 OR7C1O76099 320 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-207ENST00000475549 PF4P02776 101 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 IGHV3-43DP0DP04 118 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 GZMHP20718 246 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 DCKP27707 260 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 KCNJ3P48549 501 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 RAB7AP51149 207 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 ARHGDIBP52566 201 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 F2RL1P55085 397 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 PRR20EP86478 221 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 PRR20CP86479 221 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 PRR20DP86480 221 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 PRR20BP86481 221 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 PRR20AP86496 221 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 ZNF816Q0VGE8 651 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-207ENST00000475549 HES1Q14469 280 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 SLC22A6Q4U2R8 563 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 CT45A1Q5HYN5 189 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 DEFB121Q5J5C9 76 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 KHDC1LQ5JSQ8 128 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 DDI2Q5TDH0 399 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 SIGIRRQ6IA17 410 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 ZNF497Q6ZNH5 498 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 LCNL1Q6ZST4 164 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 MOB3BQ86TA1 216 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 STPG2Q8N412 459 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 LINC00311Q8N616 119 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 ZFP41Q8N8Y5 198 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 C8orf31Q8N9H6 132 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 Q8N9W7 124 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 ZNF439Q8NDP4 499 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 CT45A3Q8NHU0 189 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 GGHQ92820 318 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 ARL11Q969Q4 196 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 SMIM19Q96E16 107 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 MRPL48Q96GC5 212 aaKnown RBP5.52□□□□□ -1.53
HDAC3-207ENST00000475549 RITA1Q96K30 269 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 MYCBPQ99417 103 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-207ENST00000475549 ZNF184Q99676 751 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-207ENST00000475549 METTL9Q9H1A3 318 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 PCDHB16Q9NRJ7 776 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 GFOD1Q9NXC2 390 aa5.52□□□□□ -1.53
HDAC3-207ENST00000475549 RCC2Q9P258 522 aaKnown RBP5.52□□□□□ -1.53
HDAC3-207ENST00000475549 DIMT1Q9UNQ2 313 aaKnown RBP5.52□□□□□ -1.53
HDAC3-207ENST00000475549 AMMECR1Q9Y4X0 333 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-207ENST00000475549 DSCAML1Q8TD84 2053 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 TRBV5-7A0A0A0MS05 114 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 TMEM30CPA0ZSE6 113 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 SDCBPO00560 298 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-207ENST00000475549 ORC5O43913 435 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 GAPDHP04406 335 aaKnown RBP5.51□□□□□ -1.53
HDAC3-207ENST00000475549 RPLP1P05386 114 aaKnown RBP5.51□□□□□ -1.53
HDAC3-207ENST00000475549 GNAO1P09471 354 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 GTF2F2P13984 249 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 RCC1P18754 421 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-207ENST00000475549 SERPINA2P20848 420 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 BDKRB2P30411 391 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 GPR12P47775 334 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 GP2P55259 537 aaKnown RBP5.51□□□□□ -1.53
HDAC3-207ENST00000475549 ADARB1P78563 741 aaKnown RBP5.51□□□□□ -1.53
HDAC3-207ENST00000475549 CFHR3Q02985 330 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 RIPK1Q13546 671 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms