RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 C11orf88Q6PI97 169 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 TMEM108Q6UXF1 575 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 TMED4Q7Z7H5 227 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 RTN4RL2Q86UN3 420 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 LHFPL1Q86WI0 220 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 POC1AQ8NBT0 407 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 SCCPDHQ8NBX0 429 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 NUP37Q8NFH4 326 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 DMRTB1Q96MA1 342 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 TREM2Q9NZC2 230 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 MGAT4CQ9UBM8 478 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 MGAT4AQ9UM21 535 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 TRBV6-6A0A0A6YYG2 114 aa11.58□□□□□ -0.56
HDAC6-215ENST00000465457 IGHV3-13P01766 116 aa11.58□□□□□ -0.56
HDAC6-215ENST00000465457 GLP1RP43220 463 aa11.58□□□□□ -0.56
HDAC6-215ENST00000465457 KLF3P57682 345 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-215ENST00000465457 ZNF154Q13106 437 aa11.58□□□□□ -0.56
HDAC6-215ENST00000465457 PRR31Q5SQ13 230 aa11.58□□□□□ -0.56
HDAC6-215ENST00000465457 MOB1BQ7L9L4 216 aa11.58□□□□□ -0.56
HDAC6-215ENST00000465457 LYG2Q86SG7 212 aa11.58□□□□□ -0.56
HDAC6-215ENST00000465457 PEG10Q86TG7 708 aaKnown RBP11.58□□□□□ -0.56
HDAC6-215ENST00000465457 C12orf45Q8N5I9 185 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-215ENST00000465457 ZBTB8BQ8NAP8 495 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-215ENST00000465457 TMEM185AQ8NFB2 350 aa11.58□□□□□ -0.56
HDAC6-215ENST00000465457 ZNF486Q96H40 463 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-215ENST00000465457 CHMP1AQ9HD42 196 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-215ENST00000465457 VSIG4Q9Y279 399 aa11.58□□□□□ -0.56
HDAC6-215ENST00000465457 PLSCR5A0PG75 271 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 TMEM89A2RUT3 159 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 OR2AT4A6NND4 320 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 RGS11O94810 467 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 NAPSAO96009 420 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 HLA-AP01891 365 aaKnown RBP11.57□□□□□ -0.56
HDAC6-215ENST00000465457 CTXN2P0C2S0 81 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 OR5H8P0DN80 308 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 CD200P41217 278 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 SEC61A1P61619 476 aaKnown RBP11.57□□□□□ -0.56
HDAC6-215ENST00000465457 ZNF146Q15072 292 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 KCNJ8Q15842 424 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 MST1LQ2TV78 715 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 TMEM128Q5BJH2 165 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 LIN54Q6MZP7 749 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 MUC20Q8N307 709 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-215ENST00000465457 OR2AK2Q8NG84 335 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 ZFAND1Q8TCF1 268 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 PHB2Q99623 299 aa11.57□□□□□ -0.56
HDAC6-215ENST00000465457 ZNF230Q9UIE0 474 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-215ENST00000465457 C14orf166Q9Y224 244 aaKnown RBP11.57□□□□□ -0.56
HDAC6-215ENST00000465457 IGLV3-9A0A075B6K5 115 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 A0A0B4J2A0 478 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 ATP6V1G2-DDX39BF2Z307 99 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 SH2D1BO14796 132 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 DEGS1O15121 323 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 TMPRSS2O15393 492 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 MLNRO43193 412 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 OR2A4O95047 310 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 NXPH2O95156 264 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 PTBP3O95758 552 aaKnown RBP11.56□□□□□ -0.56
HDAC6-215ENST00000465457 CXCL3P19876 107 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 CD34P28906 385 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 DHRS2Q13268 280 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 DHRS11Q6UWP2 260 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 WDR86Q86TI4 376 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 FAM90A1Q86YD7 464 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 OR10Z1Q8NGY1 313 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 MARCH1Q8TCQ1 289 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 NEK7Q8TDX7 302 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 MRGPRFQ96AM1 343 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 RADILQ96JH8 1075 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 OR2A7Q96R45 310 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 HES4Q9HCC6 221 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 DECR2Q9NUI1 292 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 RASL12Q9NYN1 266 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 SHPKQ9UHJ6 478 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 GPR132Q9UNW8 380 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 ATP23Q9Y6H3 246 aa11.56□□□□□ -0.56
HDAC6-215ENST00000465457 FAM172BPA6NC97 362 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 VSTM5A8MXK1 200 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 F8VVB4 439 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 F8VWA3 439 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 NDUFS8O00217 210 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 CDIPTO14735 213 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 FABP7O15540 132 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 RHBDL1O75783 438 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 DUS4LO95620 317 aaKnown RBP11.55□□□□□ -0.56
HDAC6-215ENST00000465457 HLA-GP17693 338 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 C4BPBP20851 252 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 ZBTB25P24278 435 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 CFHR2P36980 270 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 KCNJ3P48549 501 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 NPY4RP50391 375 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 IL13RA1P78552 427 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 SWI5Q1ZZU3 235 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 SMIM21Q3B7S5 101 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 ALKBH6Q3KRA9 238 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 AADACL3Q5VUY0 350 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 SUMF2Q8NBJ7 301 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 MITD1Q8WV92 249 aa11.55□□□□□ -0.56
HDAC6-215ENST00000465457 HDHD3Q9BSH5 251 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-215ENST00000465457 DPCDQ9BVM2 203 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms