RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 SHHQ15465 462 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 DEFB115Q30KQ5 88 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 PLPPR5Q32ZL2 321 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 SPIN3Q5JUX0 258 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 C1orf194Q5T5A4 169 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 FAM90A2PQ658T7 463 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF343Q6P1L6 599 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF66Q6ZN08 573 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 RABEPKQ7Z6M1 372 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 CENPVQ7Z7K6 275 aaPredicted RBP6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 TBC1D26Q86UD7 250 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 C20orf196Q8IYI0 205 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 MAML2Q8IZL2 1156 aaPredicted RBP6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 D2HGDHQ8N465 521 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 ARL6IP6Q8N6S5 226 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 C12orf76Q8N812 135 aaPredicted RBP6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 OR5D18Q8NGL1 313 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 OR2T10Q8NGZ9 312 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 RNF138Q8WVD3 245 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM54Q969K7 222 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 PIGTQ969N2 578 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF524Q96C55 264 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 SMIM7Q9BQ49 75 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 EMC6Q9BV81 110 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 RTN4RQ9BZR6 473 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 MAP1LC3BQ9GZQ8 125 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 FKBP11Q9NYL4 201 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 OR14J1Q9UGF5 321 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 WASF3Q9UPY6 502 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 GAB2Q9UQC2 676 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 LAMP3Q9UQV4 416 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 HS3ST3B1Q9Y662 390 aa6.2□□□□□ -1.42
CLSTN1-204ENST00000464286 ATG2AQ2TAZ0 1938 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 EXPH5Q8NEV8 1989 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 A0A0C4DFX4 3053 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 OR6C6A6NF89 314 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 ZFP92A6NM28 416 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 CD300LBA8K4G0 201 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 CEBPZOSA8MTT3 80 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 PROB1E7EW31 1015 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 F5H5K5 113 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 H3BS24 57 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 DHHO43323 396 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 ADAM20O43506 726 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 DUX1O43812 170 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 NRASP01111 189 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 SERPINA7P05543 415 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 DBHP09172 617 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 OMGP23515 440 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 MDH2P40926 338 aaKnown RBP6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 UBE2NP61088 152 aaKnown RBP6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 PAX5Q02548 391 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 DLX2Q07687 328 aaPredicted RBP6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 RNPS1Q15287 305 aaKnown RBP6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 ADIRFQ15847 76 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 COX19Q49B96 90 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 PDZD11Q5EBL8 140 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 NMSQ5H8A3 153 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 ACTL10Q5JWF8 245 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 FAM27BQ5VT28 67 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 MOB1BQ7L9L4 216 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 P4HA3Q7Z4N8 544 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 THNSL2Q86YJ6 484 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 NPRL2Q8WTW4 380 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 CA5BP1Q8WTZ4 195 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 BSCL2Q96G97 398 aaPredicted RBP6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 REEP6Q96HR9 211 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 JSRP1Q96MG2 331 aaPredicted RBP6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 HIST1H2AAQ96QV6 131 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 SF3B5Q9BWJ5 86 aaKnown RBP6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 TPSD1Q9BZJ3 242 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 STRADBQ9C0K7 418 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 PCED1AQ9H1Q7 454 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 GPR173Q9NS66 373 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 SLC39A9Q9NUM3 307 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 PLEK2Q9NYT0 353 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 ST3GAL6Q9Y274 331 aa6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 ARID1BQ8NFD5 2236 aaPredicted RBP6.19□□□□□ -1.42
CLSTN1-204ENST00000464286 PHF3Q92576 2039 aaKnown RBP6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 IGKV1D-8A0A087WSZ0 117 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF816-ZNF321PA0A0X1KG74 233 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 CTXND1A0A1B0GTU2 59 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 TCRBV21S2A2A0A5A6 115 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM210A6NLX4 147 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 C10orf142B7Z368 130 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 C17orf112F2Z3M2 114 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 F6UZH7 168 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 H3BML4 177 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 TOX3O15405 576 aaPredicted RBP6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 CHST1O43916 411 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 PDE6DO43924 150 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF737O75373 536 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 CST7O76096 145 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 SCGB1D1O95968 90 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 PFN1P07737 140 aaKnown RBP6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 IL11P20809 199 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 OPRM1P35372 400 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 APLNRP35414 380 aa6.18□□□□□ -1.42
CLSTN1-204ENST00000464286 CNN1P51911 297 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 770 ms