RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 PLA1AQ53H76 456 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 PAN3Q58A45 887 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 KRBOX4Q5JUW0 171 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 C1orf100Q5SVJ3 147 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 PRAMEF5Q5TYX0 476 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 C11orf87Q6NUJ2 197 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 GLIPR1L1Q6UWM5 242 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 ZNF367Q7RTV3 350 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 LINC00596Q86U02 117 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 TMEM219Q86XT9 240 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 NKAIN3Q8N8D7 197 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 SUMF2Q8NBJ7 301 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 TMEM104Q8NE00 496 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR11H6Q8NGC7 330 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR13A1Q8NGR1 328 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 PHYHIPQ92561 330 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 TMEM203Q969S6 136 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 R3HDM4Q96D70 268 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 Q96M66 194 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 MGLLQ99685 303 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 UQCC2Q9BRT2 126 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 DPCDQ9BVM2 203 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 CCDC90BQ9GZT6 254 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 KCNK15Q9H427 330 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 NCOR1P1Q9H4R4 102 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 HEXA-AS1Q9H8Q6 139 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 TAS2R3Q9NYW6 316 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 KIF25Q9UIL4 384 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 DNAH1Q9P2D7 4330 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 CSMD3Q7Z407 3707 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 TRGV10A0A0A0MS01 117 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 IGHV2-26A0A0B4J1V2 119 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 SHISA3A0PJX4 238 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 ZNF780AO75290 641 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR7C1O76099 320 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 IGLL1P15814 213 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 CDK2P24941 298 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 KCNJ3P48549 501 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 QRFPP83859 136 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 EMX1Q04741 257 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 UNC119Q13432 240 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 HSD17B12Q53GQ0 312 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 UBE2UQ5VVX9 321 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 AWAT2Q6E213 333 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 SIGIRRQ6IA17 410 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 HEPN1Q6WQI6 88 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 CEACAM19Q7Z692 300 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 TRAPPC6BQ86SZ2 158 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 RTN4RL2Q86UN3 420 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 WFDC9Q8NEX5 89 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR4F17Q8NGA8 305 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR4P4Q8NGL7 312 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR13D1Q8NGV5 346 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR4F4Q96R69 305 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 TMEM133Q9H2Q1 129 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 BANF2Q9H503 90 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 LINC00574Q9H8X3 128 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 ZNF286AQ9HBT8 521 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 ING3Q9NXR8 418 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 BLOC1S6Q9UL45 172 aa6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 TBL2Q9Y4P3 447 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-210ENST00000462553 EPPK1P58107 5090 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 STARD9Q9P2P6 4700 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 A0A087X0M5 115 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 TRAV39A0A0B4J263 110 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 A0A1B0GX30 115 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 hCG_1809904A0A1W2PP81 198 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 A0A1W2PPE2 198 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 A0A1W2PR64 198 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 A0A1W2PRV1 198 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 FUOMA2VDF0 154 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 FAM172BPA6NC97 362 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 ZNF729A6NN14 1252 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 SLC22A1O15245 554 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 MRPS14O60783 128 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 MPIG6BO95866 241 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 IGLV1-47P01700 117 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 CSTBP04080 98 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 ARG1P05089 322 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 GTF2F2P13984 249 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 MGMTP16455 207 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 SRMP19623 302 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 SSTR5P35346 364 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 GLP1RP43220 463 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 BLCAPP62952 87 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 CD83Q01151 205 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 GPR176Q14439 515 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 TRAM1Q15629 374 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 TCTEX1D4Q5JR98 221 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 VAX1Q5SQQ9 334 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR10K2Q6IF99 312 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 CD200R1LQ6Q8B3 271 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 ZNF497Q6ZNH5 498 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 SPARTQ8N0X7 666 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 GAPTQ8N292 157 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 FOXRED1Q96CU9 486 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 MRPS24Q96EL2 167 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 KIRREL1Q96J84 757 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 OCSTAMPQ9BR26 566 aa6.33□□□□□ -1.4
CDC42BPA-210ENST00000462553 CLEC7AQ9BXN2 247 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms