RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 IGHV1-45A0A0A0MS14 117 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 ZNF716A6NP11 495 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 CXCL13O43927 109 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 UMODP07911 640 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 CCNOP22674 350 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 RAC1P63000 192 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 C9orf135Q5VTT2 229 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 OR51H1Q8NH63 302 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 NEK7Q8TDX7 302 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 RBMXL1Q96E39 390 aaKnown RBP10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 DOCK7Q96N67 2140 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 CLEC18AA5D8T8 446 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 OR5H1A6NKK0 313 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 CD55P08174 381 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 SRFP11831 508 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 CEACAM1P13688 526 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 GPM6AP51674 278 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 ARL16Q0P5N6 197 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 HNF4GQ14541 408 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 SLC25A24Q6NUK1 477 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 Q6ZRM9 215 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 AAED1Q7RTV5 226 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 WDR5BQ86VZ2 330 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 CLEC18CQ8NCF0 446 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 GFOD1Q9NXC2 390 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 TCFL5Q9UL49 500 aa10.04□□□□□ -0.8
PDZRN3-203ENST00000462146 TOX3O15405 576 aaPredicted RBP10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 NAPSAO96009 420 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 IAPPP10997 89 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 COX6A1P12074 109 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 MMP9P14780 707 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 B3GALT5-AS1P59052 145 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 BAXQ07812 192 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 IGFBP7Q16270 282 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 GGNQ86UU5 652 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 OR56B2PQ8NGI1 322 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 GPR146Q96CH1 333 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 ZNF488Q96MN9 340 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 FAM86C1Q9NVL1 165 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 PTRH2Q9Y3E5 179 aaKnown RBP10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 PHOX2AO14813 284 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 PGLYRP1O75594 196 aaPredicted RBP10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 RFPL3SP0C7P2 107 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 PSG2P11465 335 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 ZNF787Q6DD87 383 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 C1orf87Q8N0U7 546 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 SNIP1Q8TAD8 396 aaKnown RBP10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 CPT1CQ8TCG5 803 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 A0A1B0GU03 582 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 TUSC2O75896 110 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 HBE1P02100 147 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 SSR4P51571 173 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 IL24Q13007 206 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 ABHD3Q8WU67 409 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 ZNF845Q96IR2 970 aaPredicted RBP10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 IMMP1LQ96LU5 166 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 MTCH1Q9NZJ7 389 aa10.03□□□□□ -0.8
PDZRN3-203ENST00000462146 KIAA1324LA8MWY0 1029 aaPredicted RBP10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 PTBP3O95758 552 aaKnown RBP10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 METTL15P1P0C7V9 234 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 BCL2P10415 239 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 CARD18P57730 90 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 RAC3P60763 192 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 PRDX4Q13162 271 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 WDR25Q64LD2 544 aaPredicted RBP10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 BEND4Q6ZU67 534 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 SH2D2AQ9NP31 389 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 TRAV39A0A0B4J263 110 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 CLDN15P56746 228 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 PCSK4Q6UW60 755 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 HAPLN4Q86UW8 402 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 STX12Q86Y82 276 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 DMRTC2Q8IXT2 367 aaPredicted RBP10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 NECAP1Q8NC96 275 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 OR5D13Q8NGL4 314 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 OR1K1Q8NGR3 316 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 CA5BP1Q8WTZ4 195 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 PACRGQ96M98 296 aaPredicted RBP10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 GPR35Q9HC97 309 aa10.02□□□□□ -0.81
PDZRN3-203ENST00000462146 A0A096LPE4 126 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 A0A1W2PPZ6 126 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 H0Y980 276 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 SYNGR1O43759 233 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 CYB5R3P00387 301 aaPredicted RBP10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 MMP7P09237 267 aaPredicted RBP10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 OR13D1Q8NGV5 346 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 UBALD1Q8TB05 177 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 DNASE2BQ8WZ79 361 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 ABHD14BQ96IU4 210 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 SF3B5Q9BWJ5 86 aaKnown RBP10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 SDF2L1Q9HCN8 221 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 CISD1Q9NZ45 108 aaKnown RBP10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 LRFN1Q9P244 771 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 OR14J1Q9UGF5 321 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 DOCK11Q5JSL3 2073 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 MED12LQ86YW9 2145 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 ELOA3CA0A087WX78 387 aaPredicted RBP10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 LOC102723996A0A087X1L8 192 aa10.01□□□□□ -0.81
PDZRN3-203ENST00000462146 CLDN34H7C241 214 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms