RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 HMGN3Q15651 99 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 SLC35E4Q6ICL7 350 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 TMEM108Q6UXF1 575 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 LRP11Q86VZ4 500 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 CMTM1Q8IZ96 169 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 RELL2Q8NC24 303 aaPredicted RBP15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 NUP37Q8NFH4 326 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 LILRB1Q8NHL6 650 aaPredicted RBP15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 UFSP2Q9NUQ7 469 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 AUP1Q9Y679 476 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 CHD3Q12873 2000 aaKnown RBP15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 hCG_1807616A0A1W2PRN6 198 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 ATP6V1G2-DDX39BF2Z307 99 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 H0YIZ8 118 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 WNT9BO14905 357 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 PHF1O43189 567 aaPredicted RBP15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 PTAFRP25105 342 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 RAB32Q13637 225 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 SP6Q3SY56 376 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 PRR30Q53SZ7 412 aaPredicted RBP15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 C5orf24Q7Z6I8 188 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 LRRC29Q8WV35 223 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 TMEM222Q9H0R3 208 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 ZFP57Q9NU63 452 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 GSKIPQ9P0R6 139 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 TMED3Q9Y3Q3 217 aa15.9■□□□□ 0.14
SEMA3D-202ENST00000444867 ACACBO00763 2458 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 IGKV1D-13A0A0B4J2D9 117 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 PIGBOS1A0A0B4J2F0 54 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 ZSCAN5BA6NJL1 495 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 IGKV1-13P0DP09 117 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 ZNF818PQ6ZRF7 136 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 TBC1D26Q86UD7 250 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 ST8SIA2Q92186 375 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 CNTNAP3BQ96NU0 1288 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 ARPC5LQ9BPX5 153 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 VKORC1Q9BQB6 163 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 CNTNAP3Q9BZ76 1288 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 KCNIP1Q9NZI2 227 aa15.89■□□□□ 0.13
SEMA3D-202ENST00000444867 DUXBA0A1W2PPF3 345 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 ANKRD34BA5PLL1 514 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 SRRM5B3KS81 715 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 WNT2P09544 360 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 PAX5Q02548 391 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 SMCO1Q147U7 214 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 RND1Q92730 232 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 MEGF10Q96KG7 1140 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 TMEM56Q96MV1 263 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 AQP10Q96PS8 301 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 TP53RKQ96S44 253 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 CCL28Q9NRJ3 127 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 TMEM56-RWDD3S4R434 201 aa15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 SPENQ96T58 3664 aaKnown RBP15.88■□□□□ 0.13
SEMA3D-202ENST00000444867 TMEM8BA6NDV4 472 aa15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 PSPNO60542 156 aa15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 RLN2P04090 185 aa15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 CEBPDP49716 269 aaPredicted RBP15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 BVESQ8NE79 360 aa15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 OR10V1Q8NGI7 309 aa15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 PHYHIPLQ96FC7 376 aa15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 TAF9BQ9HBM6 251 aa15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 OR5AC2Q9NZP5 309 aa15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 SH3BGRL2Q9UJC5 107 aa15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 UBE2J1Q9Y385 318 aaPredicted RBP15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 PTPRQQ9UMZ3 2332 aa15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 DSPP15924 2871 aaKnown RBP15.87■□□□□ 0.13
SEMA3D-202ENST00000444867 HSD17B6O14756 317 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 SPDEFO95238 335 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 LUMP51884 338 aaPredicted RBP15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 S100A10P60903 97 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 VHLLQ6RSH7 139 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 LYZL2Q7Z4W2 148 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 OR1S1Q8NH92 325 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 IL1F10Q8WWZ1 152 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 IL22RA2Q969J5 263 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 AKR1E2Q96JD6 320 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 OR2V2Q96R30 315 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 DMRTA2Q96SC8 542 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 OOEPA6NGQ2 149 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 H0Y980 276 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 UCP1P25874 307 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 GATA4P43694 442 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 OR3A1P47881 315 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 KLRB1Q12918 225 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 BEX5Q5H9J7 111 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 TMEM268Q5VZI3 342 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 ALKAL2Q6UX46 152 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 C22orf34Q6ZV56 151 aa15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 RRNAD1Q96FB5 475 aaKnown RBP15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 ZNF471Q9BX82 626 aaPredicted RBP15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 MRPL37Q9BZE1 423 aaKnown RBP15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 ERRFI1Q9UJM3 462 aaPredicted RBP15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 MAP1BP46821 2468 aaKnown RBP15.86■□□□□ 0.13
SEMA3D-202ENST00000444867 MGAQ8IWI9 3026 aa15.85■□□□□ 0.13
SEMA3D-202ENST00000444867 TPRP12270 2363 aaKnown RBP15.85■□□□□ 0.13
SEMA3D-202ENST00000444867 LEUTXA8MZ59 168 aa15.85■□□□□ 0.13
SEMA3D-202ENST00000444867 F5H0A9 414 aaPredicted RBP15.85■□□□□ 0.13
SEMA3D-202ENST00000444867 PGLYRP1O75594 196 aaPredicted RBP15.85■□□□□ 0.13
SEMA3D-202ENST00000444867 DEDDO75618 318 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms