RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 ASB10Q8WXI3 467 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 ZNF703Q9H7S9 590 aaPredicted RBP11.03□□□□□ -0.64
HERC3-203ENST00000407637 NPIPA1Q9UND3 350 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 UBE2J1Q9Y385 318 aaPredicted RBP11.03□□□□□ -0.64
HERC3-203ENST00000407637 CLEC18AA5D8T8 446 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 F2Z2F3 143 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 F6UZH7 168 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 IGLC2P0DOY2 106 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 IGLC3P0DOY3 106 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 PAX9P55771 341 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 SUMO1P63165 101 aaKnown RBP11.03□□□□□ -0.64
HERC3-203ENST00000407637 MSMO1Q15800 293 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 FFAR4Q5NUL3 377 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 C16orf54Q6UWD8 224 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 C20orf196Q8IYI0 205 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 CLEC18CQ8NCF0 446 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 CADM4Q8NFZ8 388 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 THAP3Q8WTV1 239 aaPredicted RBP11.03□□□□□ -0.64
HERC3-203ENST00000407637 GATAD1Q8WUU5 269 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 NUDT11Q96G61 164 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 LOXL4Q96JB6 756 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 SAMD10Q9BYL1 202 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 TMEM222Q9H0R3 208 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 RYDENQ9NUL5 291 aaKnown RBP11.03□□□□□ -0.64
HERC3-203ENST00000407637 LOC102724200A0A096LPH7 203 aaPredicted RBP11.02□□□□□ -0.65
HERC3-203ENST00000407637 C5orf63A6NC05 138 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 TNFSF14O43557 240 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 FCGR2AP12318 317 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 DEFB110Q30KQ9 67 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 BRICD5Q6PL45 260 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 Q8N976 141 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 OR4F5Q8NH21 305 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 SCGB1C1Q8TD33 95 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 LHX4Q969G2 390 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 PIGTQ969N2 578 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 OR4F4Q96R69 305 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 FAM103A1Q9BTL3 118 aaKnown RBP11.02□□□□□ -0.65
HERC3-203ENST00000407637 POLR1DQ9Y2S0 133 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 MUC22E2RYF6 1773 aaPredicted RBP11.02□□□□□ -0.65
HERC3-203ENST00000407637 TMED7-TICAM2A0A0A6YYA0 188 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 A0A1W2PQ45 241 aaPredicted RBP11.02□□□□□ -0.65
HERC3-203ENST00000407637 A0A1W2PQY0 241 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 ZNF814B7Z6K7 855 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 DIRC3C9JPN6 131 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 MPPED1O15442 326 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 RAC2P15153 192 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 ZNF133P52736 654 aaPredicted RBP11.02□□□□□ -0.65
HERC3-203ENST00000407637 HERV-K104P61576 105 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 C1orf185Q5T7R7 199 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 TMPRSS7Q7RTY8 843 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 TMEM144Q7Z5S9 345 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 SELENOHQ8IZQ5 122 aaKnown RBP11.02□□□□□ -0.65
HERC3-203ENST00000407637 OR2D3Q8NGH3 330 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 CORO2AQ92828 525 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 ELSPBP1Q96BH3 223 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 KCNK17Q96T54 332 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 ZDHHC11Q9H8X9 412 aa11.02□□□□□ -0.65
HERC3-203ENST00000407637 RBM7Q9Y580 266 aaKnown RBP11.02□□□□□ -0.65
HERC3-203ENST00000407637 A0A0U1RQV5 110 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 ADH5P11766 374 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 KIR2DS3Q14952 304 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 OCIAD2Q56VL3 154 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 C1orf174Q8IYL3 243 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 ZNF321PQ8N8H1 164 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 NXF5Q9H1B4 397 aaKnown RBP11.01□□□□□ -0.65
HERC3-203ENST00000407637 CST9LQ9H4G1 147 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 MOB1AQ9H8S9 216 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 ST3GAL6Q9Y274 331 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 E9PLN8 166 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 SH2D1BO14796 132 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 WNT2P09544 360 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 GP1BBP13224 206 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 CTSEP14091 401 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 DRD3P35462 400 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 ID3Q02535 119 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 POU3F1Q03052 451 aaPredicted RBP11.01□□□□□ -0.65
HERC3-203ENST00000407637 PRTGQ2VWP7 1150 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.01□□□□□ -0.65
HERC3-203ENST00000407637 STARD4Q96DR4 205 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 Q96M66 194 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 EMC6Q9BV81 110 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 HDAC8Q9BY41 377 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 FGF22Q9HCT0 170 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 HSPB7Q9UBY9 170 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 LHFPL6Q9Y693 200 aa11.01□□□□□ -0.65
HERC3-203ENST00000407637 TMEM250H0YL14 139 aa11□□□□□ -0.65
HERC3-203ENST00000407637 NPIPB7O75200 414 aa11□□□□□ -0.65
HERC3-203ENST00000407637 CLPSP04118 112 aa11□□□□□ -0.65
HERC3-203ENST00000407637 NPBWR2P48146 333 aa11□□□□□ -0.65
HERC3-203ENST00000407637 SRPXP78539 464 aa11□□□□□ -0.65
HERC3-203ENST00000407637 MORN2Q502X0 79 aa11□□□□□ -0.65
HERC3-203ENST00000407637 TBC1D26Q86UD7 250 aa11□□□□□ -0.65
HERC3-203ENST00000407637 SLC39A11Q8N1S5 342 aa11□□□□□ -0.65
HERC3-203ENST00000407637 PSMF1Q92530 271 aa11□□□□□ -0.65
HERC3-203ENST00000407637 ABHD14BQ96IU4 210 aa11□□□□□ -0.65
HERC3-203ENST00000407637 RNF2Q99496 336 aa11□□□□□ -0.65
HERC3-203ENST00000407637 CCDC3Q9BQI4 270 aa11□□□□□ -0.65
HERC3-203ENST00000407637 APOOQ9BUR5 198 aa11□□□□□ -0.65
HERC3-203ENST00000407637 KLHL13Q9P2N7 655 aa11□□□□□ -0.65
HERC3-203ENST00000407637 SERGEFQ9UGK8 458 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms