RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 NPIPA2E9PIF3 369 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 NPIPA3F8WFD2 350 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 IGKV1-13P0DP09 117 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 DEFA4P12838 97 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 LMO1P25800 156 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 PLPPR5Q32ZL2 321 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 RAET1LQ5VY80 246 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 NCR3LG1Q68D85 454 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 CALHM1Q8IU99 346 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 D2HGDHQ8N465 521 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 MOB3AQ96BX8 217 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 CCDC74BQ96LY2 380 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 OXGR1Q96P68 337 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 ULBP2Q9BZM5 246 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 CD207Q9UJ71 328 aa8.5□□□□□ -1.05
PTCHD4-202ENST00000398738 CYB5R3P00387 301 aaPredicted RBP8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 NRASP01111 189 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 HBE1P02100 147 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 WNT5AP41221 380 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 KIAA0895LQ68EN5 471 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 OR8G2PQ6IF36 304 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 Q6ZPA2 131 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 TMEM183AQ8IXX5 376 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 SELENOHQ8IZQ5 122 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 OR6X1Q8NH79 312 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 RBMXL1Q96E39 390 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 C2orf88Q9BSF0 95 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 NDUFAF3Q9BU61 184 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 MRPL37Q9BZE1 423 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 PRDM14Q9GZV8 571 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 TMEM222Q9H0R3 208 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 IL36RNQ9UBH0 155 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 FBXL7Q9UJT9 491 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 DKKL1Q9UK85 242 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 RBM7Q9Y580 266 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 DOCK11Q5JSL3 2073 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 BCL2P10415 239 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 EGR1P18146 543 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 CCL1P22362 96 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 FAM3BP58499 235 aaPredicted RBP8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 NUTF2P61970 127 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 GNB2P62879 340 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 PAX5Q02548 391 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 ENDOGQ14249 297 aaKnown RBP8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 HLA-BQ31612 363 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 C9orf135Q5VTT2 229 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 TCEAL6Q6IPX3 200 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 SLC16A14Q7RTX9 510 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 SPTSSAQ969W0 71 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 SNHG12Q9BXW3 62 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 GP6Q9HCN6 339 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 NBEAQ8NFP9 2946 aa8.49□□□□□ -1.05
PTCHD4-202ENST00000398738 A0A0G2JRQ6 117 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 H7BYZ3 331 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 DFFBO76075 338 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 TK1P04183 234 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 COX5BP10606 129 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 B4GALT1P15291 398 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 TCN2P20062 427 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 GZMHP20718 246 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 CHRNA7P36544 502 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 TAS2R30P59541 319 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 TNFRSF9Q07011 255 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 SHBQ15464 509 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 SPANXN5Q5MJ07 72 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 ODF3L1Q8IXM7 274 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 ZNF441Q8N8Z8 693 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 GATAD1Q8WUU5 269 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 NINJ1Q92982 152 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 SGCZQ96LD1 299 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 ALKBH3Q96Q83 286 aaPredicted RBP8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 OR5B12Q96R08 314 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 SPIN2AQ99865 258 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 SPIN2BQ9BPZ2 258 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 SMDT1Q9H4I9 107 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 Q9N2K0 584 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 DOCK7Q96N67 2140 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 IGHV3-64DA0A0J9YX35 117 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 GALR1P47211 349 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 PMP22Q01453 160 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 BTNL3Q6UXE8 466 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 OR13D1Q8NGV5 346 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 LHX4Q969G2 390 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 ATP5SQ99766 215 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 SDF2L1Q9HCN8 221 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 R4GN57 208 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 A0A1B0GW64 132 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 A0A1B0GX78 115 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 RPL36A-HNRNPH2H7BZ11 118 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 DHHO43323 396 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 CDS2O95674 445 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 IL18BPO95998 194 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 SERPINE2P07093 398 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 HNF1AP20823 631 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 TEX38Q6PEX7 206 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 EXTL1Q92935 676 aa8.48□□□□□ -1.05
PTCHD4-202ENST00000398738 MRGPRX4Q96LA9 322 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms