RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 IGSF11Q5DX21 431 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 TOR2AQ5JU69 321 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 NSUN5P2Q63ZY6 315 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 TCTE3Q8IZS6 198 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 SPICQ8N5J4 248 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 RGP1Q92546 391 aaPredicted RBP11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 RBPMSQ93062 196 aaKnown RBP11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 ZGRF1Q86YA3 2104 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 A1L4Q6 167 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 ZNF716A6NP11 495 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 SYNGR3O43761 229 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 FABP1P07148 127 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 COX6B1P14854 86 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 POLR2GP62487 172 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 IL13RA2Q14627 380 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 PLA2G2CQ5R387 149 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 ABLIM2Q6H8Q1 611 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 FAM219AQ8IW50 185 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 BCL2L2Q92843 193 aaPredicted RBP11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 PCGF1Q9BSM1 259 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 CLDN16Q9Y5I7 305 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 CYB5R3P00387 301 aaPredicted RBP11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 CELA3BP08861 270 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 REG1BP48304 166 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 SURF2Q15527 256 aaPredicted RBP11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 ZBTB37Q5TC79 503 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 TGIF2LYQ8IUE0 185 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 TGIF2LXQ8IUE1 241 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 SLC25A32Q9H2D1 315 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 FAM24AA6NFZ4 105 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 OR7C2O60412 319 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 CXCL3P19876 107 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 PSMB3P49720 205 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 FOXG1P55316 489 aaPredicted RBP11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 TMEM255AQ5JRV8 349 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 ZNF680Q8NEM1 530 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 MARC2Q969Z3 335 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 TMEM230Q96A57 120 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 TMEM56Q96MV1 263 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 NXF2Q9GZY0 626 aaKnown RBP11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 TUBG2Q9NRH3 451 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 CA10Q9NS85 328 aa11.27□□□□□ -0.6
PTPRN2-202ENST00000389416 UBE2L5PA0A1B0GUS4 154 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 DHRS7CA6NNS2 312 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 SCAF4O95104 1147 aaKnown RBP11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 MPC2O95563 127 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 METTL15P1P0C7V9 234 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 ACKR3P25106 362 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 TMEM267Q0VDI3 215 aaPredicted RBP11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 EXOSC2Q13868 293 aaKnown RBP11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 ZNF260Q3ZCT1 412 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 OR4A4PQ8NGN8 299 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 OR4S2Q8NH73 311 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 CORO2AQ92828 525 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 DIRC2Q96SL1 478 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 SCTP09683 121 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 OR13C7P0DN81 318 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 GLRXP35754 106 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 HAGHQ16775 308 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 FAM122CQ6P4D5 195 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 MUC15Q8N387 334 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 ADAD2Q8NCV1 583 aaKnown RBP11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 HEXA-AS1Q9H8Q6 139 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 WDR87Q6ZQQ6 2873 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 MPV17P39210 176 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 PTGDSP41222 190 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 ST8SIA2Q92186 375 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 ZDHHC8Q9ULC8 765 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 INSIG2Q9Y5U4 225 aa11.27□□□□□ -0.61
PTPRN2-202ENST00000389416 SNAPINO95295 136 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 SNRNP40Q96DI7 357 aaKnown RBP11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 DLL3Q9NYJ7 618 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 SRP14P37108 136 aaKnown RBP11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 P2RX3P56373 397 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 LINC00596Q86U02 117 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 MRGPRFQ96AM1 343 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 R3HDM4Q96D70 268 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 SSX3Q99909 188 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 AMMECR1Q9Y4X0 333 aaPredicted RBP11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 CENPFP49454 3210 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 A0A087WV48 116 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 VDAC1P21796 283 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 CD40P25942 277 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 C1QL2Q7Z5L3 287 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 SVBPQ8N300 66 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 OR52L2PQ8NGH6 319 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 BORCS7Q96B45 105 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 ADTRPQ96IZ2 230 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 ELOVL5Q9NYP7 299 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 FGF7P21781 194 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 TBR1Q16650 682 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 LIAT1Q6ZQX7 453 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 MRPL24Q96A35 216 aaKnown RBP11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 MALSU1Q96EH3 234 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 PKIBQ9C010 78 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 HES4Q9HCC6 221 aa11.26□□□□□ -0.61
PTPRN2-202ENST00000389416 CACFD1Q9UGQ2 172 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms