RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 COX4I2Q96KJ9 171 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 NCOR1P1Q9H4R4 102 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 NARFLQ9H6Q4 476 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 MGAT4AQ9UM21 535 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 ZNF736B4DX44 427 aaPredicted RBP17.11■□□□□ 0.33
SHISA4-201ENST00000362011 WNT2P09544 360 aa17.11■□□□□ 0.33
SHISA4-201ENST00000362011 AKAIN1P0CW23 69 aa17.11■□□□□ 0.33
SHISA4-201ENST00000362011 DYRK1AQ13627 763 aa17.11■□□□□ 0.33
SHISA4-201ENST00000362011 CLEC9AQ6UXN8 241 aa17.11■□□□□ 0.33
SHISA4-201ENST00000362011 Q6ZS49 121 aa17.11■□□□□ 0.33
SHISA4-201ENST00000362011 FGFRL1Q8N441 504 aa17.11■□□□□ 0.33
SHISA4-201ENST00000362011 TPRX1Q8N7U7 411 aa17.11■□□□□ 0.33
SHISA4-201ENST00000362011 DEDD2Q8WXF8 326 aa17.11■□□□□ 0.33
SHISA4-201ENST00000362011 MBNL3Q9NUK0 354 aaKnown RBP17.11■□□□□ 0.33
SHISA4-201ENST00000362011 ODAMA1E959 279 aa17.1■□□□□ 0.33
SHISA4-201ENST00000362011 F5H0A9 414 aaPredicted RBP17.1■□□□□ 0.33
SHISA4-201ENST00000362011 FCN3O75636 299 aa17.1■□□□□ 0.33
SHISA4-201ENST00000362011 TBPP20226 339 aa17.1■□□□□ 0.33
SHISA4-201ENST00000362011 HLA-DMAP28067 261 aa17.1■□□□□ 0.33
SHISA4-201ENST00000362011 FAUP35544 74 aaKnown RBP17.1■□□□□ 0.33
SHISA4-201ENST00000362011 TAS2R46P59540 309 aa17.1■□□□□ 0.33
SHISA4-201ENST00000362011 HLA-DRB3P79483 266 aa17.1■□□□□ 0.33
SHISA4-201ENST00000362011 ACTBL2Q562R1 376 aa17.1■□□□□ 0.33
SHISA4-201ENST00000362011 STEAP1BQ6NZ63 245 aa17.1■□□□□ 0.33
SHISA4-201ENST00000362011 H1FXQ92522 213 aaKnown RBP17.1■□□□□ 0.33
SHISA4-201ENST00000362011 C7orf50Q9BRJ6 194 aaKnown RBP17.1■□□□□ 0.33
SHISA4-201ENST00000362011 TBC1D24Q9ULP9 559 aa17.1■□□□□ 0.33
SHISA4-201ENST00000362011 IGKV1D-8A0A087WSZ0 117 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 TRAV39A0A0B4J263 110 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 KIR2DS1A0A191URI9 304 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 CENPXA8MT69 81 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 PLA2G10O15496 165 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 CD74P04233 296 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 CD3DP04234 171 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 RCC1P18754 421 aaPredicted RBP17.09■□□□□ 0.33
SHISA4-201ENST00000362011 KIR2DS4P43632 304 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 NPY4RP50391 375 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 ARPC4P59998 168 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 ASAH1Q13510 395 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 KIR2DS1Q14954 304 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 CHRFAM7AQ494W8 412 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 C6orf183Q5T699 404 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 TRAT1Q6PIZ9 186 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 ZNF841Q6ZN19 808 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 PRIMA1Q86XR5 153 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 POC5Q8NA72 575 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 OR5H2Q8NGV7 314 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 KCNIP1Q9NZI2 227 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 OR6C3Q9NZP0 311 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 LPAR3Q9UBY5 353 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 ANXA10Q9UJ72 324 aa17.09■□□□□ 0.33
SHISA4-201ENST00000362011 VWC2LB2RUY7 222 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 TRDCB7Z8K6 153 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 GPR37O15354 613 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 RAB3DO95716 219 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 GLP1RP43220 463 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 OR3A3P47888 321 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 HMGN3Q15651 99 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 CLEC12BQ2HXU8 276 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 RNASE10Q5GAN6 216 aaKnown RBP17.08■□□□□ 0.32
SHISA4-201ENST00000362011 OR5AP2Q8NGF4 316 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 OR4C16Q8NGL9 310 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 OR13A1Q8NGR1 328 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 HRASLSQ9HDD0 168 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 CLN8Q9UBY8 286 aa17.08■□□□□ 0.32
SHISA4-201ENST00000362011 NAP1L6A6NFF2 107 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 M0QYG6 137 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 LYRM1O43325 122 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 LY6G6DO95868 133 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 IGHV2-5P01817 119 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 PMP2P02689 132 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 HRH1P35367 487 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 GNB2P62879 340 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 MEF2CQ06413 473 aaPredicted RBP17.07■□□□□ 0.32
SHISA4-201ENST00000362011 MEF2DQ14814 521 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 CDK10Q15131 360 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 WDR25Q64LD2 544 aaPredicted RBP17.07■□□□□ 0.32
SHISA4-201ENST00000362011 MZT2BQ6NZ67 158 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 ZNF554Q86TJ5 538 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 CLDND2Q8NHS1 167 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 MRGPRDQ8TDS7 321 aa17.07■□□□□ 0.32
SHISA4-201ENST00000362011 IGHV4-30-2A0A087WSY4 118 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 TRGV10A0A0A0MS01 117 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 hADV38S2A0JD32 116 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 FABP7O15540 132 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 GSTT2P0CG29 244 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 RPL31P62899 125 aaKnown RBP17.06■□□□□ 0.32
SHISA4-201ENST00000362011 CR1LQ2VPA4 569 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 ESCO2Q56NI9 601 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 PRSS57Q6UWY2 283 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 ZNF565Q8N9K5 539 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 OR4A4PQ8NGN8 299 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 RAB39BQ96DA2 213 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 DCTN5Q9BTE1 182 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 SSBP3Q9BWW4 388 aaPredicted RBP17.06■□□□□ 0.32
SHISA4-201ENST00000362011 TINAGL1Q9GZM7 467 aaPredicted RBP17.06■□□□□ 0.32
SHISA4-201ENST00000362011 C11orf54Q9H0W9 315 aaPredicted RBP17.06■□□□□ 0.32
SHISA4-201ENST00000362011 TAF9BQ9HBM6 251 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 NECAP2Q9NVZ3 263 aa17.06■□□□□ 0.32
SHISA4-201ENST00000362011 ARHGAP32A7KAX9 2087 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms