RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 LYZP61626 148 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 U3KQ87 197 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 ARHGAP21Q5T5U3 1957 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 RIPPLY2Q5TAB7 128 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 ZNF66Q6ZN08 573 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 ELOVL5Q9NYP7 299 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 DSCAMO60469 2012 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 MRGPRDQ8TDS7 321 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 MYEOVQ96EZ4 313 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 ZNF714Q96N38 554 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 FZR1Q9UM11 496 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 TUSC1Q2TAM9 212 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 POM121Q96HA1 1249 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 KLK11Q9UBX7 282 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 S1PR2O95136 353 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 GLI4P10075 376 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 ANKRD34AQ69YU3 496 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 CCDC190Q86UF4 302 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 OR52B4Q8NGK2 314 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 TMEM45BQ96B21 275 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 OR10C1Q96KK4 312 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 TXNDC17Q9BRA2 123 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 CST7O76096 145 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 WNT3P56703 355 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 NECAP1Q8NC96 275 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 SPNS1Q9H2V7 528 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 GPR35Q9HC97 309 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 FXYD1O00168 92 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 UBE2L3P68036 154 aaKnown RBP10.78□□□□□ -0.68
FN1-202ENST00000336916 KIAA0040Q15053 153 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 ABHD14BQ96IU4 210 aa10.78□□□□□ -0.68
FN1-202ENST00000336916 ALX3O95076 343 aa10.77□□□□□ -0.68
FN1-202ENST00000336916 NHLH1Q02575 133 aa10.77□□□□□ -0.68
FN1-202ENST00000336916 NHLH2Q02577 135 aa10.77□□□□□ -0.68
FN1-202ENST00000336916 EBLN2Q6P2I7 272 aa10.77□□□□□ -0.68
FN1-202ENST00000336916 MAP1LC3CQ9BXW4 147 aa10.77□□□□□ -0.68
FN1-202ENST00000336916 GPR27Q9NS67 375 aa10.77□□□□□ -0.68
FN1-202ENST00000336916 ADAMTS9Q9P2N4 1935 aa10.77□□□□□ -0.68
FN1-202ENST00000336916 J3QW42 95 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 NPY1RP25929 384 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 SLC23A3Q6PIS1 610 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 VN1R4Q7Z5H5 301 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 C5orf17Q8NAS9 161 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 LIMK1P53667 647 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 TEPPQ6URK8 271 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 GCSAMQ8N6F7 178 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 GAPDHP04406 335 aaKnown RBP10.77□□□□□ -0.69
FN1-202ENST00000336916 FTH1P19P0C7X4 201 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 CDKN2AP42771 156 aaKnown RBP10.77□□□□□ -0.69
FN1-202ENST00000336916 FMODQ06828 376 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 CD226Q15762 336 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 MYPOPQ86VE0 399 aaPredicted RBP10.77□□□□□ -0.69
FN1-202ENST00000336916 WSB1Q9Y6I7 421 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 CRYBB2P43320 205 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 FAM27BQ5VT28 67 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 TUSC5Q8IXB3 177 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 DNASE2BQ8WZ79 361 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 SNRNP40Q96DI7 357 aaKnown RBP10.77□□□□□ -0.69
FN1-202ENST00000336916 SLC25A33Q9BSK2 321 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 ZNF552Q9H707 407 aaPredicted RBP10.77□□□□□ -0.69
FN1-202ENST00000336916 NAT8BQ9UHF3 227 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 ING1Q9UK53 422 aaPredicted RBP10.77□□□□□ -0.69
FN1-202ENST00000336916 PPIAL4EA0A075B759 164 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 MAP1LC3B2A6NCE7 125 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 PPIAL4DF5H284 164 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 PPIAL4FP0DN26 164 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 OR3A1P47881 315 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 UQCRFS1P47985 274 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 LINC00303Q3SY05 128 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 FAM214BQ7L5A3 538 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 ABHD1Q96SE0 405 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 MAP1LC3BQ9GZQ8 125 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 Q9N2K0 584 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 PPIAL4AQ9Y536 164 aa10.77□□□□□ -0.69
FN1-202ENST00000336916 M0R143 59 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 KLF7O75840 302 aaPredicted RBP10.76□□□□□ -0.69
FN1-202ENST00000336916 ORM2P19652 201 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 USF1P22415 310 aaPredicted RBP10.76□□□□□ -0.69
FN1-202ENST00000336916 EXOSC2Q13868 293 aaKnown RBP10.76□□□□□ -0.69
FN1-202ENST00000336916 TBC1D26Q86UD7 250 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 EML2O95834 649 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 P01737 135 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 MMP16P51512 607 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 FAM209BQ5JX69 171 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 SLC35E3Q7Z769 313 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 OR4A5Q8NH83 315 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 UFC1Q9Y3C8 167 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 NPIPB13A6NJU9 1138 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 NPIPB4C9JG80 1138 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 COL9A1P20849 921 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 ZP3P21754 424 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 TEX261Q6UWH6 196 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 MARVELD1Q9BSK0 173 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 TRAV30A0A087WSZ9 112 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 OGG1O15527 345 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 TNFSF10P50591 281 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 TMEM179BQ7Z7N9 219 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 OR10G4Q8NGN3 311 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 OR10G9Q8NGN4 311 aa10.76□□□□□ -0.69
FN1-202ENST00000336916 OR10G7Q8NGN6 311 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms