RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 CDX4O14627 284 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 HOXA4Q00056 320 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 TMEM240Q5SV17 173 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 TDHQ8IZJ6 230 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 H1FOOQ8IZA3 346 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 OR8B12Q8NGG6 310 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 OR4A4PQ8NGN8 299 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 OR10D3Q8NH80 312 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 GPBAR1Q8TDU6 330 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 PPIHO43447 177 aaKnown RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 NAAAQ02083 359 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 OTPQ5XKR4 325 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 NSUN5P2Q63ZY6 315 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 C17orf47Q8NEP4 570 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 DSPPQ9NZW4 1301 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 COL6A6A6NMZ7 2263 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 METTL12A8MUP2 240 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 BCL2P10415 239 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF32P17041 273 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 SKP2Q13309 424 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 CD226Q15762 336 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 TP53RKQ96S44 253 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 ABHD1Q96SE0 405 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 NPTNQ9Y639 398 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 A0A1B0GTL3 188 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 SRSF9Q13242 221 aaKnown RBP eCLIP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 RTN4RL1Q86UN2 441 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 MYOZ3Q8TDC0 251 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 ZG16BQ96DA0 208 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 COL25A1Q9BXS0 654 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 DMRTC1Q5HYR2 192 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 AMMECR1LQ6DCA0 310 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 FAM109BQ6ICB4 259 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 ORAI1Q96D31 301 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 MFRPQ9BY79 579 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 CHST5Q9GZS9 411 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 OR2W1Q9Y3N9 320 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 F2RL2O00254 374 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 SEC11BP0C7V7 166 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 ACAA2P42765 397 aaKnown RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 KIR2DL1P43626 348 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 KIR2DL2P43627 348 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 SEZ6L2Q6UXD5 910 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 TGIF2LXQ8IUE1 241 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 OR8B3Q8NGG8 313 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 RAB1CQ92928 201 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 OR8B2Q96RD0 313 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF256Q9Y2P7 627 aaPredicted RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 ADAMTS7Q9UKP4 1686 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 LIPT2A6NK58 231 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 GABRA1P14867 456 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 DIRC3C9JPN6 131 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 DNPH1O43598 174 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 MELTFP08582 738 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 IRF3Q14653 427 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 MRGPRDQ8TDS7 321 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 DOK5Q9P104 306 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 H3BQ15 152 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 SERF2P84101 59 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 UBE2V2Q15819 145 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 LHFPL5Q8TAF8 219 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 MEGF10Q96KG7 1140 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 FREM1Q5H8C1 2179 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 KIR3DL2P43630 455 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 RAC3P60763 192 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 MRPS11P82912 194 aaKnown RBP7.03□□□□□ -1.28
LIMD1-201ENST00000273317 CXorf67Q86X51 503 aaPredicted RBP7.03□□□□□ -1.28
LIMD1-201ENST00000273317 ACTL6AO96019 429 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 COL8A1P27658 744 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 UQCRFS1P47985 274 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 CAMPP49913 170 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 WDFY1Q8IWB7 410 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 RALYQ9UKM9 306 aaKnown RBP7.03□□□□□ -1.28
LIMD1-201ENST00000273317 GCGP01275 180 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 TCTN1Q2MV58 587 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 C12orf54Q6X4T0 127 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 OR4B1Q8NGF8 309 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 SLC25A33Q9BSK2 321 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 OR2H1Q9GZK4 316 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 RNF122Q9H9V4 155 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 DOCK4Q8N1I0 1966 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 FABP2P12104 132 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 PWWP2BQ6NUJ5 590 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 SRD5A3Q9H8P0 318 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 ZMIZ1Q9ULJ6 1067 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 SHISA7A6NL88 538 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 ORM2P19652 201 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 CCDC144NLQ6NUI1 221 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 WDR31Q8NA23 367 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 OR8A1Q8NGG7 326 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 OR1L8Q8NGR8 309 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 PEX11BO96011 259 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 PTP4A1Q93096 173 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 SLC52A3Q9NQ40 469 aa7.03□□□□□ -1.28
LIMD1-201ENST00000273317 GABRG2P18507 467 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 DLX1P56177 255 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 HIGD1AQ9Y241 93 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 KCNMB2Q9Y691 235 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 ZIC1Q15915 447 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 OR4P4Q8NGL7 312 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms