RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 ZNF729A6NN14 1252 aaPredicted RBP13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 RGS5O15539 181 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 RBP4P02753 201 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 RCC1P18754 421 aaPredicted RBP13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 PRTN3P24158 256 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 HACD4Q5VWC8 232 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 TNFRSF14Q92956 283 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 UPRTQ96BW1 309 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 PCGF1Q9BSM1 259 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 C6orf62Q9GZU0 229 aaPredicted RBP13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 C12orf4Q9NQ89 552 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 A3GALT2U3KPV4 340 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 TEP1Q99973 2627 aaKnown RBP13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 TMEM235A6NFC5 223 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 POM121CA8CG34 1229 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 NPIPB11E5RHQ5 1161 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 MELTFP08582 738 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 CD3GP09693 182 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 TMEM69Q5SWH9 247 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 FAM120AOSQ5T036 256 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 ZNF880Q6PDB4 577 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 HEPN1Q6WQI6 88 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 VMO1Q7Z5L0 202 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 LAX1Q8IWV1 398 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 IZUMO1Q8IYV9 350 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 DTX3Q8N9I9 347 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 MMP27Q9H306 513 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 AUNIPQ9H7T9 357 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 CHMP1AQ9HD42 196 aaPredicted RBP13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 SIRT7Q9NRC8 400 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 CALYQ9NYX4 217 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 NSD1Q96L73 2696 aaPredicted RBP13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 FAM25AB3EWG3 89 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 FAM25CB3EWG5 89 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 FAM25GB3EWG6 89 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 C15orf65H3BRN8 121 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 ORC5O43913 435 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 MMP23AO75900 390 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 IGHV1-8P0DP01 117 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 SSTR5P35346 364 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 MRPS15P82914 257 aaKnown RBP13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 ARFRP1Q13795 201 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 PNLIPRP3Q17RR3 467 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 C6orf183Q5T699 404 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 ZNF554Q86TJ5 538 aa13.62□□□□□ -0.23
CHCHD3-201ENST00000262570 C12orf77C9JDV5 145 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 CLPXO76031 633 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 HLA-DQB1P01920 261 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 OMGP23515 440 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 DLX1P56177 255 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 TAS2R20P59543 309 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 PITPNAQ00169 270 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 TRAT1Q6PIZ9 186 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 MOB1BQ7L9L4 216 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 RFESDQ8TAC1 157 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 ARL11Q969Q4 196 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 ADAM30Q9UKF2 790 aa13.61□□□□□ -0.23
CHCHD3-201ENST00000262570 FSHBP01225 129 aa13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 MNDAP41218 407 aa13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 KLF17Q5JT82 389 aaPredicted RBP13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 ZNF782Q6ZMW2 699 aaPredicted RBP13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 TEX29Q8N6K0 151 aa13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 NANPQ8TBE9 248 aa13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 NUDCD2Q8WVJ2 157 aa13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 TAF9BQ9HBM6 251 aa13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 Q9N2K0 584 aa13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 KCNIP1Q9NZI2 227 aa13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 EXTL2Q9UBQ6 330 aa13.6□□□□□ -0.23
CHCHD3-201ENST00000262570 CENPVL3A0A0U1RRI6 287 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 INAFM1C9JVW0 142 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 RNASEK-C17orf49H0YIS7 233 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 SSX5O60225 188 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 FCGR3AP08637 254 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 PTHLHP12272 177 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 HOXB4P17483 251 aaPredicted RBP13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 GDNFP39905 211 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 GNG2P59768 71 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 PRB3Q04118 309 aaPredicted RBP13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 PRAMEF5Q5TYX0 476 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 HCP5Q6MZN7 132 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 CNIH2Q6PI25 160 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 OR10A7Q8NGE5 316 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 SETD6Q8TBK2 473 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 LHX4Q969G2 390 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 KIRREL1Q96J84 757 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 HEXA-AS1Q9H8Q6 139 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 IDI2-AS1Q9NZ38 188 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 MGAT4AQ9UM21 535 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 MRPS7Q9Y2R9 242 aaKnown RBP13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 SESN1Q9Y6P5 492 aa13.59□□□□□ -0.23
CHCHD3-201ENST00000262570 TRAV40A0A0B4J280 105 aa13.58□□□□□ -0.23
CHCHD3-201ENST00000262570 SPINT2O43291 252 aa13.58□□□□□ -0.23
CHCHD3-201ENST00000262570 TPPPO94811 219 aa13.58□□□□□ -0.23
CHCHD3-201ENST00000262570 HBZP02008 142 aa13.58□□□□□ -0.23
CHCHD3-201ENST00000262570 HNF1AP20823 631 aa13.58□□□□□ -0.23
CHCHD3-201ENST00000262570 DTYMKP23919 212 aa13.58□□□□□ -0.23
CHCHD3-201ENST00000262570 TALDO1P37837 337 aa13.58□□□□□ -0.23
CHCHD3-201ENST00000262570 HMGN3Q15651 99 aa13.58□□□□□ -0.23
CHCHD3-201ENST00000262570 SRSF7Q16629 238 aaKnown RBP eCLIP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms