RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 ST6GAL1P15907 406 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 RPL34P49207 117 aaKnown RBP9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 LYZP61626 148 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 NIT1Q86X76 327 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 CALHM1Q8IU99 346 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 OR1N2Q8NGR9 330 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 SSMEM1Q8WWF3 244 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 RELBQ01201 579 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 ZNF141Q15928 474 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 TCTN1Q2MV58 587 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 OR1L1Q8NH94 360 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 APOBEC3DQ96AK3 386 aaPredicted RBP9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 KCNK17Q96T54 332 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 HIST1H4GQ99525 98 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 SLC25A33Q9BSK2 321 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 TMEM204Q9BSN7 226 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 SAP30LQ9HAJ7 183 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 ZNF391Q9UJN7 358 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 MS4A18H0YCH9 400 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 H0YL77 283 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 CDC42EP2O14613 210 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 HBZP02008 142 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 GAPDHP04406 335 aaKnown RBP9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 OR4A8P0C604 315 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 VDAC1P21796 283 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 OTX1P32242 354 aaPredicted RBP9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 LGALS7P47929 136 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 PRSS12P56730 875 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 TRA2AQ13595 282 aaKnown RBP eCLIP9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 MS4A18Q3C1V0 323 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 ZNF260Q3ZCT1 412 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 SAPCD1Q5SSQ6 148 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 GAPTQ8N292 157 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 AMER3Q8N944 861 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 SPACA9Q96E40 222 aaPredicted RBP9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 OR2V2Q96R30 315 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 RARRES2Q99969 163 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 PMCHL2Q9BQD1 86 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 PRDM14Q9GZV8 571 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 LMX1BO60663 402 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 CDS2O95674 445 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 FOLR2P14207 255 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 CEACAM3P40198 252 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 TMEM50BP56557 158 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 SLC35B1P78383 322 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 ADIPOQQ15848 244 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 DEGS2Q6QHC5 323 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 OR11H4Q8NGC9 324 aa9.48□□□□□ -0.89
SLC6A4-201ENST00000261707 RPL30P62888 115 aaKnown RBP9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 HYAL1Q12794 435 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 FZD5Q13467 585 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 SPATA46Q5T0L3 261 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 TMEM38BQ9NVV0 291 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 KLK13Q9UKR3 277 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 KCNE1BA0A087WTH5 132 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 CA6P23280 308 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 SLC25A30Q5SVS4 291 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 GUSBP11Q6P575 273 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 WFDC3Q8IUB2 231 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 FSCN3Q9NQT6 498 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 DNAJB12Q9NXW2 375 aaKnown RBP9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 ZDHHC8Q9ULC8 765 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 AMY1AP04745 511 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 DPTQ07507 201 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 ZNF683Q8IZ20 524 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 HDGFL3Q9Y3E1 203 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 COX6CP09669 75 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 HIST1H1BP16401 226 aaKnown RBP9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 GNG3P63215 75 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 MAJINQ3KP22 176 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 ERASQ7Z444 233 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 NT5CQ8TCD5 201 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 ZNF707Q96C28 371 aaPredicted RBP9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 GUCD1Q96NT3 240 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 LEPROTL1O95214 131 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 STAG3L3P0CL85 134 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 EPHA8P29322 1005 aaPredicted RBP9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 MFAP2P55001 183 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 SOX8P57073 446 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 FAM169BQ8N8A8 192 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 GPR27Q9NS67 375 aa9.47□□□□□ -0.89
SLC6A4-201ENST00000261707 FAM157AC9JC47 383 aa9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 H0YIG0 161 aa9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 CXCL13O43927 109 aa9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 BTF3P20290 206 aaKnown RBP9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 RBPMS2Q6ZRY4 209 aaKnown RBP9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 OR8I2Q8N0Y5 310 aa9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 COA4Q9NYJ1 87 aa9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 F11RQ9Y624 299 aaKnown RBP9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 N4BP2Q86UW6 1770 aaPredicted RBP9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 A0A1W2PPC4 97 aa9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 H0Y8X5 98 aa9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 GLIPR1P48060 266 aa9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 IGHV3-43A0A0B4J1X8 118 aa9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 ZGLP1P0C6A0 271 aa9.46□□□□□ -0.89
SLC6A4-201ENST00000261707 IGHV3-43DP0DP04 118 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms