RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 LYRM2Q9NU23 88 aaPredicted RBP12.29□□□□□ -0.44
HIF3A-202ENST00000244303 ZNF724A8MTY0 619 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 TNFSF12O43508 249 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 LILRA1O75019 489 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 PITX3O75364 302 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 NXPH3O95157 252 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 AGAP20933 346 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 UCP1P25874 307 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 ATP6V0CP27449 155 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 ZNF266Q14584 549 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 NMSQ5H8A3 153 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 C20orf204Q6ZNR8 217 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 TMEM251Q8N6I4 163 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 SUMF2Q8NBJ7 301 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 OR5A2Q8NGI9 324 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 HIST1H2AAQ96QV6 131 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 PLEKHF2Q9H8W4 249 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 hCG_1809904A0A1W2PP81 198 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 A0A1W2PR64 198 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 A0A1W2PRV1 198 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 CD300LBA8K4G0 201 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 UMAD1C9J7I0 102 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 PROB1E7EW31 1015 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 SLC33A1O00400 549 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-202ENST00000244303 ARR3P36575 388 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 ADAM5Q6NVV9 412 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 NUFIP2Q7Z417 695 aaKnown RBP12.28□□□□□ -0.44
HIF3A-202ENST00000244303 ODF3L1Q8IXM7 274 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 TMEM252Q8N6L7 170 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 OR2G3Q8NGZ4 309 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 MRPL30Q8TCC3 161 aaKnown RBP12.28□□□□□ -0.44
HIF3A-202ENST00000244303 CD300LFQ8TDQ1 290 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 TMEM9BQ9NQ34 198 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 GLRX2Q9NS18 164 aa12.28□□□□□ -0.44
HIF3A-202ENST00000244303 HS3ST1O14792 307 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 GPR37O15354 613 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 NQO2P16083 231 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 RAB5AP20339 215 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 VDAC1P21796 283 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 VAMP2P63027 116 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 PLGLB1Q02325 96 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 OR5C1Q8NGR4 320 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 TCTEX1D2Q8WW35 142 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 OR5P3Q8WZ94 311 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 ABHD14AQ9BUJ0 271 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 PBDC1Q9BVG4 233 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 SLC25A31Q9H0C2 315 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 METTL1Q9UBP6 276 aaKnown RBP12.27□□□□□ -0.44
HIF3A-202ENST00000244303 MIOXQ9UGB7 285 aa12.27□□□□□ -0.44
HIF3A-202ENST00000244303 DUXBA0A1W2PPF3 345 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 CLEC18AA5D8T8 446 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 CST7O76096 145 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 TMEM50AO95807 157 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 CTXN2P0C2S0 81 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 OR2B8PP59922 312 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 PLP2Q04941 152 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 PCSK4Q6UW60 755 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 CMTM1Q8IZ96 169 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 C17orf78Q8N4C9 275 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 FAM24BQ8N5W8 94 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 LINC00469Q8N7U9 141 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 ZFP62Q8NB50 900 aaPredicted RBP12.27□□□□□ -0.45
HIF3A-202ENST00000244303 CLEC18CQ8NCF0 446 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 PLPPR1Q8TBJ4 325 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 RDH5Q92781 318 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 SLC35B3Q9H1N7 401 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 KNTC1P50748 2209 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 MED12LQ86YW9 2145 aa12.27□□□□□ -0.45
HIF3A-202ENST00000244303 CDRT15L2A8MXV6 281 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 SLC34A2O95436 690 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 OR13C7P0DN81 318 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 S100PP25815 95 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 WNT5AP41221 380 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 DYNLT3P51808 116 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 ID3Q02535 119 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 KDF1Q8NAX2 398 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-202ENST00000244303 LFNGQ8NES3 379 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 ABHD14BQ96IU4 210 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 OR51M1Q9H341 326 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-202ENST00000244303 KCNJ16Q9NPI9 418 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 PRSS50Q9UI38 385 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 TRAV24A0A0B4J272 114 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 ANKRD30BLA7E2S9 258 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 H0Y980 276 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 PGLYRP1O75594 196 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-202ENST00000244303 ARG1P05089 322 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 IGFBP7Q16270 282 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 HIKESHIQ53FT3 197 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 TMEM217Q8N7C4 229 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 OR5D13Q8NGL4 314 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 RARRES2Q99969 163 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 PLK3Q9H4B4 646 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 OPA3Q9H6K4 179 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 TUBA4BQ9H853 241 aa12.26□□□□□ -0.45
HIF3A-202ENST00000244303 BDP1A6H8Y1 2624 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 CHST1O43916 411 aa12.25□□□□□ -0.45
HIF3A-202ENST00000244303 CCL20P78556 96 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms