RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 TMEM38BQ9NVV0 291 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 COA4Q9NYJ1 87 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 TCFL5Q9UL49 500 aa11.7□□□□□ -0.54
NEK4-201ENST00000233027 B4DEV8 164 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 MS4A18H0YCH9 400 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 RPL7P18124 248 aaKnown RBP11.69□□□□□ -0.54
NEK4-201ENST00000233027 RUNX1Q01196 453 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 MS4A18Q3C1V0 323 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 HOGA1Q86XE5 327 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 WDR31Q8NA23 367 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 FAM117AQ9C073 453 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 PAM16Q9Y3D7 125 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 P01737 135 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 CHST5Q9GZS9 411 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 AMMECR1Q9Y4X0 333 aaPredicted RBP11.69□□□□□ -0.54
NEK4-201ENST00000233027 ZNF831Q5JPB2 1677 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
NEK4-201ENST00000233027 SNURFLB1AK76 121 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 NPIPB8E9PQR5 432 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 MMP9P14780 707 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 ZNF345Q14585 488 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 C21orf62-AS1Q17RA5 79 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 TMEM211Q6ICI0 200 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 VN1R17PQ8TDU5 208 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 ANGPTL4Q9BY76 406 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 LMX1BO60663 402 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 ZNF137PP52743 207 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 C19orf57Q0VDD7 668 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 FDX2Q6P4F2 183 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 OR2D3Q8NGH3 330 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 OIT3Q8WWZ8 545 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 MAP1LC3CQ9BXW4 147 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 ASCL3Q9NQ33 180 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 WNT16Q9UBV4 365 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 RNF24Q9Y225 148 aa11.69□□□□□ -0.54
NEK4-201ENST00000233027 IGHV5-10-1A0A0J9YXX1 117 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 FOXS1O43638 330 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 PITX3O75364 302 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 WDR74Q6RFH5 385 aaPredicted RBP11.68□□□□□ -0.54
NEK4-201ENST00000233027 TMEM116Q8NCL8 245 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 SLC25A40Q8TBP6 338 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 TMEM140Q9NV12 185 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 KCNK7Q9Y2U2 307 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 A0A1W2PPC1 479 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 SNRPCP09234 159 aaKnown RBP11.68□□□□□ -0.54
NEK4-201ENST00000233027 ACP1P24666 158 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 GAB4Q2WGN9 574 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 LRRC75AQ8NAA5 344 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 SEMA7AO75326 666 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 ZNF25P17030 456 aaPredicted RBP11.68□□□□□ -0.54
NEK4-201ENST00000233027 MRGPRGQ86SM5 289 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 OR2Y1Q8NGV0 311 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 OR4X1Q8NH49 305 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 SCN3AQ9NY46 2000 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 IGKV1-8A0A0C4DH67 115 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 C7orf66A4D0T2 115 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 HELTA6NFD8 242 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 DNASE2O00115 360 aaPredicted RBP11.68□□□□□ -0.54
NEK4-201ENST00000233027 MRPL30Q8TCC3 161 aaKnown RBP11.68□□□□□ -0.54
NEK4-201ENST00000233027 SIRT7Q9NRC8 400 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 IL17BQ9UHF5 180 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 A0A1W2PP11 408 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 ZNF716A6NP11 495 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 PDE6DO43924 150 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 APCSP02743 223 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 EIF3IQ13347 325 aaKnown RBP11.68□□□□□ -0.54
NEK4-201ENST00000233027 C10orf113Q5VZT2 155 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 SOSTQ9BQB4 213 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 RNF122Q9H9V4 155 aa11.68□□□□□ -0.54
NEK4-201ENST00000233027 LY75O60449 1722 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 FCGR3AP08637 254 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 FUT5Q11128 374 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 ISXQ2M1V0 245 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 C1orf210Q8IVY1 113 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 CARFQ8N187 725 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 HLA-DQB1P01920 261 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 OR10J1P30954 320 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 CYB561D1Q8N8Q1 229 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 A0A1B0GU03 582 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 RPLP1P05386 114 aaKnown RBP11.67□□□□□ -0.54
NEK4-201ENST00000233027 IL9P15248 144 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 COL8A1P27658 744 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 HOXC8P31273 242 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
NEK4-201ENST00000233027 OR8A1Q8NGG7 326 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 OR52L2PQ8NGH6 319 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 AMELYQ99218 206 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 IGKV3-7A0A075B6H7 116 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 LIFP15018 202 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 MESP2Q0VG99 397 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 LHFPL5Q8TAF8 219 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 STARD4Q96DR4 205 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 ADTRPQ96IZ2 230 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 PGLYRP3Q96LB9 341 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 TMEM191AQ9H0A3 160 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 PCOLCE2Q9UKZ9 415 aa11.67□□□□□ -0.54
NEK4-201ENST00000233027 TRAV38-1A0A0B4J264 116 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 CD40P25942 277 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms