RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ERVH48-1M5A8F1 160 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 LHBP01229 141 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 CASP6P55212 293 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 ATXN7L3Q14CW9 347 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 IAH1Q2TAA2 248 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 INO80EQ8NBZ0 244 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 ST6GALNAC3Q8NDV1 305 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 SECTM1Q8WVN6 248 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 TMEM56Q96MV1 263 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 OR2V2Q96R30 315 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 GSX2Q9BZM3 304 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 TMEM222Q9H0R3 208 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 DNAJB11Q9UBS4 358 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 FBXO9Q9UK97 447 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 ZDHHC8Q9ULC8 765 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 TMEM56-RWDD3S4R434 201 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 HEATR1Q9H583 2144 aaKnown RBP12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 RPS10-NUDT3A0A1W2PQS6 291 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 LINC00862A6NCI5 91 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 DPRXA6NFQ7 191 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 BCL2L11O43521 198 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 HEXAP06865 529 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 ADH4P08319 380 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 CA7P43166 264 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 OR3A1P47881 315 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 CEBPDP49716 269 aaPredicted RBP12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 SP6Q3SY56 376 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 ZNF818PQ6ZRF7 136 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 CMTM1Q8IZ96 169 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 BVESQ8NE79 360 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 ERGIC1Q969X5 290 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 TP53RKQ96S44 253 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 TOLLIPQ9H0E2 274 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 TAF9BQ9HBM6 251 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 KCNIP1Q9NZI2 227 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 TMED3Q9Y3Q3 217 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 ZGRF1Q86YA3 2104 aa12.02□□□□□ -0.48
RTFDC1-201ENST00000023939 MGAQ8IWI9 3026 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 PIGBOS1A0A0B4J2F0 54 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 DUXBA0A1W2PPF3 345 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 PHF1O43189 567 aaPredicted RBP12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 COL10A1Q03692 680 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 TESK1Q15569 626 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 FBXL19-AS1Q494R0 122 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 VHLLQ6RSH7 139 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 TBC1D26Q86UD7 250 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 WFDC8Q8IUA0 241 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 OR8H3Q8N146 312 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 GCSAMQ8N6F7 178 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 COQ2Q96H96 371 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 AKR1E2Q96JD6 320 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 CNTNAP3BQ96NU0 1288 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 CNTNAP3Q9BZ76 1288 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 CCL28Q9NRJ3 127 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 IL19Q9UHD0 177 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 AUP1Q9Y679 476 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 CEP295Q9C0D2 2601 aa12.02□□□□□ -0.49
RTFDC1-201ENST00000023939 KANTRA0A1W2PQU2 76 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 OOEPA6NGQ2 149 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 ZNF737O75373 536 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 PSG2P11465 335 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 EGR1P18146 543 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 UCP1P25874 307 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 S100GP29377 79 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 PRDX2P32119 198 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 UBA52P62987 128 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 RAB32Q13637 225 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 CD177Q8N6Q3 437 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 OR10V1Q8NGI7 309 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 Q8TCH9 128 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 SCARB1Q8WTV0 552 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 DCUN1D4Q92564 292 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 IL22RA2Q969J5 263 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 AQP10Q96PS8 301 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 DIRC2Q96SL1 478 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 SHARPINQ9H0F6 387 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 NGBQ9NPG2 151 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 ZFP57Q9NU63 452 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 OR1A1Q9P1Q5 309 aa12.01□□□□□ -0.49
RTFDC1-201ENST00000023939 TRGV8A0A0C4DH27 118 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 H0Y980 276 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 SPRY3O43610 288 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 PGLYRP1O75594 196 aaPredicted RBP12□□□□□ -0.49
RTFDC1-201ENST00000023939 CDS2O95674 445 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 IGHV1-46P01743 117 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 CD55P08174 381 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 TNFSF4P23510 183 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 ASCL1P50553 236 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 LUMP51884 338 aaPredicted RBP12□□□□□ -0.49
RTFDC1-201ENST00000023939 AP2S1P53680 142 aaPredicted RBP12□□□□□ -0.49
RTFDC1-201ENST00000023939 RAB14P61106 215 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 C6orf183Q5T699 404 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 TRAT1Q6PIZ9 186 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 LYZL2Q7Z4W2 148 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 MOGAT3Q86VF5 341 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 LHFPL5Q8TAF8 219 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 FAM222BQ8WU58 562 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 ITLN1Q8WWA0 313 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 LURAP1Q96LR2 239 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 NCOR1P1Q9H4R4 102 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms