RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 GNG10P50151 68 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 SULT1A1P50225 295 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 PLP2Q04941 152 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 FABP9Q0Z7S8 132 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 PNRC1Q12796 327 aaPredicted RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 IL24Q13007 206 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 IL11RAQ14626 422 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 CYB5R2Q6BCY4 276 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 SP5Q6BEB4 398 aaPredicted RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 OR2A2Q6IF42 318 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 C16orf47Q6ZP98 133 aaPredicted RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 MRPL21Q7Z2W9 205 aaKnown RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 FAM219AQ8IW50 185 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 C20orf196Q8IYI0 205 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 FBXL14Q8N1E6 418 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 NAXEQ8NCW5 288 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 DMBX1Q8NFW5 382 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 PIGCQ92535 297 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 IL22RA2Q969J5 263 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 MALSU1Q96EH3 234 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 TVP23CQ96ET8 276 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 BTF3L4Q96K17 158 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 CLUHP3Q96NS8 147 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 FAAP24Q9BTP7 215 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 ARV1Q9H2C2 271 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 PLSCR4Q9NRQ2 329 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 BEX4Q9NWD9 120 aaPredicted RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 PRR13Q9NZ81 148 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 RBM7Q9Y580 266 aaKnown RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 LOC400499M0QZD8 3231 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 ATG2BQ96BY7 2078 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 F5P12259 2224 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 FASNP49327 2511 aaKnown RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 ZFHX2Q9C0A1 2572 aaPredicted RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 ELOA3CA0A087WX78 387 aaPredicted RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 IGKV1-9A0A0C4DH69 117 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 RBFOX3A6NFN3 312 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 UBE2CO00762 179 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 MPPED1O15442 326 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 KCNAB3O43448 404 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 OR13C7P0DN81 318 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 LIFP15018 202 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 AADACP22760 399 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 RAC3P60763 192 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 RND3P61587 244 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 EWSR1Q01844 656 aaKnown RBP eCLIP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 IL15RAQ13261 267 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 ENDOGQ14249 297 aaKnown RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 UBE2V2Q15819 145 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 HIST2H3PS2Q5TEC6 136 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 ADAM5Q6NVV9 412 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 LINC00596Q86U02 117 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 RPS19BP1Q86WX3 136 aaKnown RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 C1orf87Q8N0U7 546 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 SLAMF9Q96A28 289 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 RAB40CQ96S21 281 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 GPR61Q9BZJ8 451 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 TOLLIPQ9H0E2 274 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 OR51M1Q9H341 326 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 PNRC2Q9NPJ4 139 aaKnown RBP3.45□□□□□ -1.86
SCN1A-214ENST00000637038 GFOD1Q9NXC2 390 aa3.45□□□□□ -1.86
SCN1A-214ENST00000637038 A0A1W2PPH5 198 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 ZNF814B7Z6K7 855 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 PPP1R2P9O14990 202 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 EIF3GO75821 320 aaKnown RBP eCLIP3.44□□□□□ -1.86
SCN1A-214ENST00000637038 ONECUT2O95948 504 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 HSPB1P04792 205 aaKnown RBP3.44□□□□□ -1.86
SCN1A-214ENST00000637038 SRD5A2P31213 254 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 TAS2R30P59541 319 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 SPCS3P61009 180 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 HIST1H3AP68431 136 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 SRSF3P84103 164 aaKnown RBP3.44□□□□□ -1.86
SCN1A-214ENST00000637038 SRSF7Q16629 238 aaKnown RBP eCLIP3.44□□□□□ -1.86
SCN1A-214ENST00000637038 MPV17LQ2QL34 196 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 SAPCD1Q5SSQ6 148 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 RBMS3Q6XE24 437 aaKnown RBP3.44□□□□□ -1.86
SCN1A-214ENST00000637038 Q6ZSR3 168 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 MOB1BQ7L9L4 216 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 SAXO1Q8IYX7 474 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 ZNF610Q8N9Z0 462 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 SAP25Q8TEE9 199 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 CCDC74BQ96LY2 380 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 GPR87Q9BY21 358 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 EGLN1Q9GZT9 426 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 DECR2Q9NUI1 292 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 TMEM38BQ9NVV0 291 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 RALYQ9UKM9 306 aaKnown RBP3.44□□□□□ -1.86
SCN1A-214ENST00000637038 AMDHD2Q9Y303 409 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 EP300Q09472 2414 aaPredicted RBP3.44□□□□□ -1.86
SCN1A-214ENST00000637038 A0A087WWC5 75 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 A6NLC8 198 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 CD300LBA8K4G0 201 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 SEC14L6B5MCN3 397 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 SPRY1O43609 319 aaPredicted RBP3.44□□□□□ -1.86
SCN1A-214ENST00000637038 PPYP01298 95 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 IGLV3-1P01715 115 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 VDAC1P21796 283 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 G0S2P27469 103 aa3.44□□□□□ -1.86
SCN1A-214ENST00000637038 RBM11P57052 281 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms