RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 NECAP2Q9NVZ3 263 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 MYOTQ9UBF9 498 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 PAM16Q9Y3D7 125 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 RPL36A-HNRNPH2H7BZ11 118 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 DLEU1O43261 78 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 CYB5R3P00387 301 aaPredicted RBP11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 IFNA5P01569 189 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 GNB2P62879 340 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 SMAD4Q13485 552 aaKnown RBP11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 CALHM1Q8IU99 346 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 PLXDC1Q8IUK5 500 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 NOXO1Q8NFA2 376 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 NEK7Q8TDX7 302 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 ZNF837Q96EG3 531 aaPredicted RBP11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 RIMS4Q9H426 269 aaPredicted RBP11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 TUBG2Q9NRH3 451 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 B3GAT1Q9P2W7 334 aa11.62□□□□□ -0.55
PCDHA11-202ENST00000616325 IGHV1OR21-1A0A087WYE8 117 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 CHST1O43916 411 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 POU2F2P09086 479 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 GALR1P47211 349 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 HNRNPKP61978 463 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 ARL6IP1Q15041 203 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 SCGB1C1Q8TD33 95 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 TBX15Q96SF7 602 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 PLK3Q9H4B4 646 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 PLEKHF2Q9H8W4 249 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 PPIAL4AQ9Y536 164 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 SERPINE3A8MV23 424 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 OPN1MWP04001 364 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 LCATP04180 440 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 OPN1MW2P0DN77 364 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 OPN1MW3P0DN78 364 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 ZNF17P17021 662 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 TDGF1P3P51864 188 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 FAM3BP58499 235 aaPredicted RBP11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 FAM189A2Q15884 450 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 TOMM20LQ6UXN7 152 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 ZNF442Q9H7R0 627 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 ANKUB1A6NFN9 424 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 PROB1E7EW31 1015 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 RPLP1P05386 114 aaKnown RBP11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 CEACAM1P13688 526 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 PIGYQ3MUY2 71 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 ZNF506Q5JVG8 444 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 THEM4Q5T1C6 240 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 DEGS2Q6QHC5 323 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 BEND2Q8NDZ0 799 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 ZNF385AQ96PM9 386 aaKnown RBP11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 DIRC2Q96SL1 478 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 DEFB126Q9BYW3 111 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 VSIRQ9H7M9 311 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 ALKBH4Q9NXW9 302 aa11.61□□□□□ -0.55
PCDHA11-202ENST00000616325 A0A1B0GU03 582 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 A0A1W2PNV4 684 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 HBE1P02100 147 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 IRF2P14316 349 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 CHRNA7P36544 502 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 MS4A10Q96PG2 267 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 PATZ1Q9HBE1 687 aaKnown RBP11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 RPRMQ9NS64 109 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 OR7C1O76099 320 aaPredicted RBP11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 TK1P04183 234 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 LMO1P25800 156 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 RNF151Q2KHN1 245 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 ALKBH2Q6NS38 261 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 RHBDD1Q8TEB9 315 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 SMDT1Q9H4I9 107 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 PARD6AQ9NPB6 346 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 A0A1W2PQD3 144 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 NPIPA2E9PIF3 369 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 NPIPA3F8WFD2 350 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 GCGP01275 180 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 SELEP16581 610 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 UCP3P55916 312 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 SNAI3Q3KNW1 292 aa11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 RBMXL1Q96E39 390 aaKnown RBP11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 ACTR3CQ9C0K3 210 aaPredicted RBP11.6□□□□□ -0.55
PCDHA11-202ENST00000616325 IGHV1OR15-9A0A0B4J2B8 117 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 IGHV3-64DA0A0J9YX35 117 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 SIAH2O43255 324 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 AADACP22760 399 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 DOK3Q7L591 496 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 GNPNAT1Q96EK6 184 aaPredicted RBP11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 ADGRG7Q96K78 797 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 ALKBH3Q96Q83 286 aaPredicted RBP11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 R4GN57 208 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 IAPPP10997 89 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 RAB4AP20338 218 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 GZMHP20718 246 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 FAM90A2PQ658T7 463 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 ST8SIA1Q92185 356 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 CDCA3Q99618 268 aaPredicted RBP11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 OR51B6Q9H340 312 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 PRSS50Q9UI38 385 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 PI4KAP42356 2102 aa11.59□□□□□ -0.55
PCDHA11-202ENST00000616325 LILRA5A6NI73 299 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms