RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 PLAURQ03405 335 aa7.71□□□□□ -1.17
PDLIM5-222ENST00000615540 SLC38A11Q08AI6 406 aa7.71□□□□□ -1.17
PDLIM5-222ENST00000615540 FFAR4Q5NUL3 377 aa7.71□□□□□ -1.17
PDLIM5-222ENST00000615540 V9GYS6 101 aa7.71□□□□□ -1.17
PDLIM5-222ENST00000615540 B3GALNT1O75752 331 aa7.71□□□□□ -1.17
PDLIM5-222ENST00000615540 PTGDSP41222 190 aa7.71□□□□□ -1.17
PDLIM5-222ENST00000615540 RNF144BQ7Z419 303 aa7.71□□□□□ -1.17
PDLIM5-222ENST00000615540 MDFIC2A0A1B0GVS7 189 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 ST8SIA5O15466 376 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 OR2H2O95918 312 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 Q0VFX4 171 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 KIAA0141Q14154 515 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 IMMP1LQ96LU5 166 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 UHRF2Q96PU4 802 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 TRAF4Q9BUZ4 470 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF319Q9P2F9 582 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 AMDHD2Q9Y303 409 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 C5orf63A6NC05 138 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 TMPRSS2O15393 492 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 UCP2P55851 309 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 EWSR1Q01844 656 aaKnown RBP eCLIP7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 TMEM65Q6PI78 240 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 HIST2H3AQ71DI3 136 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 LFNGQ8NES3 379 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF552Q9H707 407 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 IL36RNQ9UBH0 155 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF107Q9UII5 783 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 NUDT19A8MXV4 375 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 DAOP14920 347 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 FOXO1Q12778 655 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 C10orf128Q5T292 105 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 LAMTOR1Q6IAA8 161 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 TMEM211Q6ICI0 200 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 SLC36A1Q7Z2H8 476 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 CBLN2Q8IUK8 224 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 MRPL41Q8IXM3 137 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 OR5A2Q8NGI9 324 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 LHX4Q969G2 390 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 SLC25A22Q9H936 323 aa7.71□□□□□ -1.18
PDLIM5-222ENST00000615540 LINC00862A6NCI5 91 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 DHRS7CA6NNS2 312 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF705FA8MVS1 300 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 C9orf172C9J069 976 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 CELA3BP08861 270 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF705DP0CH99 300 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF705BP0CI00 300 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 APELAP0DMC3 54 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 TMEM11P17152 192 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 IGFBP3P17936 291 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 IL13RA2Q14627 380 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF429Q86V71 674 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 SLC25A28Q96A46 364 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 ACY3Q96HD9 319 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 SOSTQ9BQB4 213 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 ACTR3CQ9C0K3 210 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 OOEPA6NGQ2 149 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 TMEM14DPA8MWL7 114 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 GYPAP02724 150 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 MELTFP08582 738 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 P2RY1P47900 373 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 P2RY4P51582 365 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 C9orf152Q5JTZ5 239 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 FDCSPQ8NFU4 85 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 FGFBP3Q8TAT2 258 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 TIMP4Q99727 224 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 GLRX2Q9NS18 164 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 C2orf16Q68DN1 1984 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 IGLV3-12A0A075B6K2 115 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 A0A0A6YYD4 124 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 TFF1P04155 84 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 SLC25A4P12235 298 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 ACKR3P25106 362 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 IL3RAP26951 378 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 SSX2Q16385 188 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 EIF2S3LQ2VIR3 472 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 Q96M66 194 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 POMT1Q9Y6A1 747 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 A0A1W2PRD5 423 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 A0A1W2PRF3 423 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 A0A1W2PRM7 423 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 MPTX1A8MV57 137 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 EIF3GO75821 320 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 HEXAP06865 529 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 NAT2P11245 290 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 MOB1BQ7L9L4 216 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 OR10S1Q8NGN2 331 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 GPR132Q9UNW8 380 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 OR2W1Q9Y3N9 320 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 DNPH1O43598 174 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 DTYMKP23919 212 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 PJVKQ0ZLH3 352 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 ACOT6Q3I5F7 207 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 MOB3BQ86TA1 216 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 ADAMTS17Q8TE56 1095 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 TPPP3Q9BW30 176 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 SSUH2Q9Y2M2 353 aa7.7□□□□□ -1.18
PDLIM5-222ENST00000615540 NDUFB3O43676 98 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 RD3LP0DJH9 198 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 HKR1P10072 659 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 VAX1Q5SQQ9 334 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms