RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 C5orf66Q9H5L9 145 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 TRAPPC2LQ9UL33 140 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 IGKV1-6A0A0C4DH72 117 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 TRDCB7Z8K6 153 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 IL5P05113 134 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 TRAPPC2P0DI81 140 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 TRAPPC2BP0DI82 140 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 AKR1C4P17516 323 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 ZDHHC22Q8N966 263 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 ZNRF1Q8ND25 227 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 OR11L1Q8NGX0 322 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 CCL17Q92583 94 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 EGLN1Q9GZT9 426 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 A0A1W2PPR1 153 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 IFNL4K9M1U5 179 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 CREBL2O60519 120 aaPredicted RBP17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 IRF2P14316 349 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 FXYD4P59646 89 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 SHEQ5VZ18 495 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 ZNF626Q68DY1 528 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 ZNF880Q6PDB4 577 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 Q6ZS49 121 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 FAM90A1Q86YD7 464 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 ERGIC1Q969X5 290 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 PPP1R14BQ96C90 147 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 COQ2Q96H96 371 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 VRK1Q99986 396 aaPredicted RBP17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 GPN1Q9HCN4 374 aaPredicted RBP17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 KIF25Q9UIL4 384 aa17.08■□□□□ 0.33
SNRPA1-205ENST00000558036 TRBV6-6A0A0A6YYG2 114 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 A0A1B0GW55 424 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 DUX4L2P0CJ85 424 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 DUX4L3P0CJ86 424 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 DUX4L4P0CJ87 422 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 DUX4L5P0CJ88 424 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 DUX4L6P0CJ89 424 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 DUX4L7P0CJ90 424 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 SELLP14151 372 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 DUX4L9Q6RFH8 374 aaPredicted RBP17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 DHRS11Q6UWP2 260 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 UXS1Q8NBZ7 420 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 TOMM40LQ969M1 308 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 MED30Q96HR3 178 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 DUX4Q9UBX2 424 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 GPR132Q9UNW8 380 aa17.08■□□□□ 0.32
SNRPA1-205ENST00000558036 KIR2DS1A0A191URI9 304 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 ZNF737O75373 536 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 KIR2DS4P43632 304 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 SNRPD2P62316 118 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 PPP1R1AQ13522 171 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 EDDM3AQ14507 147 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 KIR2DS1Q14954 304 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 SRSF7Q16629 238 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 SLC25A42Q86VD7 318 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 GAPTQ8N292 157 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 ANGPTL6Q8NI99 470 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 IL1F10Q8WWZ1 152 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 KIRREL1Q96J84 757 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 RTBDNQ9BSG5 229 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 ALX4Q9H161 411 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 ZNF222Q9UK12 451 aa17.07■□□□□ 0.32
SNRPA1-205ENST00000558036 PGAM2P15259 253 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 FPR2P25090 351 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 GLIPR1P48060 266 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 DHRS2Q13268 280 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 CD276Q5ZPR3 534 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 PEG10Q86TG7 708 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 SLC23A1Q9UHI7 598 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 MAB21L2Q9Y586 359 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 SPTAN1Q13813 2472 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 CEACAM18A8MTB9 384 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 HLA-AP01891 365 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 GYPAP02724 150 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 HLA-DRB3P79483 266 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 FAM222BQ8WU58 562 aa17.06■□□□□ 0.32
SNRPA1-205ENST00000558036 DYSFO75923 2080 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 UBR5O95071 2799 aaPredicted RBP17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 MEIKINA0A087WXM9 373 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 TMEM30CPA0ZSE6 113 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 LRRC30A6NM36 301 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 SNRPGP15A8MWD9 76 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 AADACP22760 399 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 VAMP1P23763 118 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 KRBOX4Q5JUW0 171 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 TMEM230Q96A57 120 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 FXYD6Q9H0Q3 95 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 ARFGEF3Q5TH69 2177 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 SMLR1H3BR10 107 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 GLP1RP43220 463 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 NKX2-5P52952 324 aaPredicted RBP17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 STUMQ69YW2 141 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 ZNF431Q8TF32 576 aaPredicted RBP17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 CCL13Q99616 98 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 DCTN5Q9BTE1 182 aa17.05■□□□□ 0.32
SNRPA1-205ENST00000558036 DOPEY1Q5JWR5 2465 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 OOEPA6NGQ2 149 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 H7C1Q1 480 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 TK1P04183 234 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 SOD3P08294 240 aa17.04■□□□□ 0.32
SNRPA1-205ENST00000558036 SULT1A3P0DMM9 295 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms