RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 RPL31P62899 125 aaKnown RBP12.05□□□□□ -0.48
SHMT2-210ENST00000553950 DGCR2P98153 550 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 MADCAM1Q13477 382 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 OLFML2AQ68BL7 652 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 LYPD2Q6UXB3 125 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 ZNF565Q8N9K5 539 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 OR52I2Q8NH67 350 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 PLPPR1Q8TBJ4 325 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 MRPL30Q8TCC3 161 aaKnown RBP12.05□□□□□ -0.48
SHMT2-210ENST00000553950 COQ2Q96H96 371 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 GAL3ST2Q9H3Q3 398 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 MBNL3Q9NUK0 354 aaKnown RBP12.05□□□□□ -0.48
SHMT2-210ENST00000553950 KIF25Q9UIL4 384 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 UBE2J1Q9Y385 318 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-210ENST00000553950 RBMX2Q9Y388 322 aaKnown RBP12.05□□□□□ -0.48
SHMT2-210ENST00000553950 LINC00312Q9Y6C7 94 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 IGHV4-30-2A0A087WSY4 118 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 FOXH1O75593 365 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 MT-ND4P03905 459 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 IL7P13232 177 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 SELLP14151 372 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 GDNFP39905 211 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 GLP1RP43220 463 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 ARPC4P59998 168 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 HLA-DRB3P79483 266 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 AESQ08117 197 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 WDR25Q64LD2 544 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-210ENST00000553950 ZNF880Q6PDB4 577 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 BRICD5Q6PL45 260 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 HOGA1Q86XE5 327 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 CLDND2Q8NHS1 167 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 SETD6Q8TBK2 473 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 H1FXQ92522 213 aaKnown RBP12.04□□□□□ -0.48
SHMT2-210ENST00000553950 DYRK2Q92630 601 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 GCDHQ92947 438 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-210ENST00000553950 TRIM63Q969Q1 353 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 C7orf50Q9BRJ6 194 aaKnown RBP12.04□□□□□ -0.48
SHMT2-210ENST00000553950 THAP7Q9BT49 309 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-210ENST00000553950 NARFLQ9H6Q4 476 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 Q9N2K0 584 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 FBN2P35556 2912 aa12.04□□□□□ -0.48
SHMT2-210ENST00000553950 A0A1B0GW55 424 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 SPINT2O43291 252 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 ORC5O43913 435 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 SSX5O60225 188 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 UPK1BO75841 260 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 TFF1P04155 84 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 CTXN2P0C2S0 81 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DUX4L2P0CJ85 424 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DUX4L3P0CJ86 424 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DUX4L4P0CJ87 422 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DUX4L5P0CJ88 424 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DUX4L6P0CJ89 424 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DUX4L7P0CJ90 424 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 NAT1P18440 290 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 GZMHP20718 246 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 USF1P22415 310 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DEFA1P59665 94 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DEFA3P59666 94 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 GUCA2AQ02747 115 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 MEF2DQ14814 521 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 RNASE12Q5GAN4 147 aaKnown RBP12.03□□□□□ -0.48
SHMT2-210ENST00000553950 C16orf87Q6PH81 154 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DUX4L9Q6RFH8 374 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-210ENST00000553950 TOMM5Q8N4H5 51 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 TMEM229BQ8NBD8 167 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 BEST4Q8NFU0 473 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 OR4A4PQ8NGN8 299 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 C8orf46Q8TAG6 207 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 HDHD3Q9BSH5 251 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DCTN5Q9BTE1 182 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 TAS2R3Q9NYW6 316 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 DUX4Q9UBX2 424 aa12.03□□□□□ -0.48
SHMT2-210ENST00000553950 KIAA2026Q5HYC2 2103 aa12.02□□□□□ -0.48
SHMT2-210ENST00000553950 PRRC2AP48634 2157 aaKnown RBP12.02□□□□□ -0.48
SHMT2-210ENST00000553950 HECTD1Q9ULT8 2610 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 CENPEQ02224 2701 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 hCG_1809904A0A1W2PP81 198 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 A0A1W2PPE2 198 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 A0A1W2PQ09 198 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 A0A1W2PR64 198 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 A0A1W2PRV1 198 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 MEIOCA2RUB1 952 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 ZNF729A6NN14 1252 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-210ENST00000553950 CENPXA8MT69 81 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 ZNF736B4DX44 427 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-210ENST00000553950 TRDCB7Z8K6 153 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 ENSAO43768 121 aaKnown RBP12.02□□□□□ -0.49
SHMT2-210ENST00000553950 RBP4P02753 201 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 PTHLHP12272 177 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 RBMXP38159 391 aaKnown RBP12.02□□□□□ -0.49
SHMT2-210ENST00000553950 GLIPR1P48060 266 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 DCTN2Q13561 401 aaKnown RBP12.02□□□□□ -0.49
SHMT2-210ENST00000553950 DYRK1AQ13627 763 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 HMGN3Q15651 99 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 CR1LQ2VPA4 569 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 CHRFAM7AQ494W8 412 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 STEAP3Q658P3 488 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 ZNF57Q68EA5 555 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-210ENST00000553950 ZNF841Q6ZN19 808 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms