RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 LINC00052Q96N35 136 aa15.31■□□□□ 0.04
PHRF1-205ENST00000533464 LHFPL6Q9Y693 200 aa15.31■□□□□ 0.04
PHRF1-205ENST00000533464 ZNHIT1O43257 154 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 TIAF1O95411 115 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 GZMHP20718 246 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 RBM11P57052 281 aaKnown RBP15.3■□□□□ 0.04
PHRF1-205ENST00000533464 B3GALNT1O75752 331 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 NQO2P16083 231 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 HLA-DRB3P79483 266 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 TEX30Q5JUR7 227 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 OR10G4Q8NGN3 311 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 OR10G9Q8NGN4 311 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 OR10G7Q8NGN6 311 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 OR4S2Q8NH73 311 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 ZNF519Q8TB69 540 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 TMEM147Q9BVK8 224 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 TRAV38-1A0A0B4J264 116 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 S100A8P05109 93 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 ISG15P05161 165 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 MRGPRFQ96AM1 343 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 R3HDM4Q96D70 268 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 MISP3Q96FF7 219 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 FAM117AQ9C073 453 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 TIMM9Q9Y5J7 89 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 TRBV5-7A0A0A0MS05 114 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 CDS2O95674 445 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 ZNF154Q13106 437 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 FAM24BQ8N5W8 94 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 BARX1Q9HBU1 254 aaPredicted RBP15.3■□□□□ 0.04
PHRF1-205ENST00000533464 ZNF318Q5VUA4 2279 aa15.3■□□□□ 0.04
PHRF1-205ENST00000533464 CDRT15L2A8MXV6 281 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 ZNF737O75373 536 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 CA11O75493 328 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 KIR2DS2P43631 304 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 CDC34P49427 236 aaPredicted RBP15.29■□□□□ 0.04
PHRF1-205ENST00000533464 FAM3AP98173 230 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 DCAF12L2Q5VW00 463 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 BVESQ8NE79 360 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 NEIL1Q96FI4 390 aaPredicted RBP15.29■□□□□ 0.04
PHRF1-205ENST00000533464 TBX6O95947 436 aaPredicted RBP15.29■□□□□ 0.04
PHRF1-205ENST00000533464 OR5H1A6NKK0 313 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 RBP4P02753 201 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 LTBRP36941 435 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 ATP6V1FQ16864 119 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 TMEM241Q24JQ0 296 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 ZNF260Q3ZCT1 412 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 FKBP11Q9NYL4 201 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 NCOR1O75376 2440 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 CLDN34H7C241 214 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 CD3EP07766 207 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 F2RP25116 425 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 C1orf100Q5SVJ3 147 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 NDFIP1Q9BT67 221 aa15.29■□□□□ 0.04
PHRF1-205ENST00000533464 A0A1W2PNV4 684 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 TMEM218A2RU14 115 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 KLF4O43474 513 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 FCGR3AP08637 254 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 UNQ9370/PRO34162Q6UXP9 181 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 OR2T6Q8NHC8 308 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 ADTRPQ96IZ2 230 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 CD200P41217 278 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 C12orf57Q99622 126 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 VAX1Q5SQQ9 334 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 OR4A4PQ8NGN8 299 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 MS4A3Q96HJ5 214 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 FAM103A1Q9BTL3 118 aaKnown RBP15.28■□□□□ 0.04
PHRF1-205ENST00000533464 SAP30LQ9HAJ7 183 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 PRDM6Q9NQX0 595 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 CLCF1Q9UBD9 225 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 LCTP09848 1927 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 LOC285556D6RIA3 1793 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 COX6A1P12074 109 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 AESQ08117 197 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 RND1Q92730 232 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 ATP5SQ99766 215 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 RNF7Q9UBF6 113 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 LPAR3Q9UBY5 353 aa15.28■□□□□ 0.04
PHRF1-205ENST00000533464 NKX2-8O15522 239 aa15.27■□□□□ 0.04
PHRF1-205ENST00000533464 FBP1P09467 338 aa15.27■□□□□ 0.04
PHRF1-205ENST00000533464 PCOLCEQ15113 449 aa15.27■□□□□ 0.04
PHRF1-205ENST00000533464 ACSM6Q6P461 480 aa15.27■□□□□ 0.04
PHRF1-205ENST00000533464 RNF122Q9H9V4 155 aa15.27■□□□□ 0.04
PHRF1-205ENST00000533464 RBFOX3A6NFN3 312 aa15.27■□□□□ 0.04
PHRF1-205ENST00000533464 TGIF1Q15583 401 aa15.27■□□□□ 0.04
PHRF1-205ENST00000533464 DTD1Q8TEA8 209 aa15.27■□□□□ 0.04
PHRF1-205ENST00000533464 TMEM18Q96B42 140 aa15.27■□□□□ 0.04
PHRF1-205ENST00000533464 DDA1Q9BW61 102 aa15.27■□□□□ 0.04
PHRF1-205ENST00000533464 SERTM2A0A1B0GWG4 89 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 TOX4O94842 621 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 EWSR1Q01844 656 aaKnown RBP eCLIP15.27■□□□□ 0.033e-6■■□□□ 11.8
PHRF1-205ENST00000533464 OR1A1Q9P1Q5 309 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 LIPGQ9Y5X9 500 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 SEMA7AO75326 666 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 SIGLECL1Q8N7X8 197 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 CHRDL1Q9BU40 450 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 CHRNA10Q9GZZ6 450 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 FAM206AQ9NX38 181 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 SLC45A2Q9UMX9 530 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 TNFSF18Q9UNG2 199 aa15.27■□□□□ 0.03
PHRF1-205ENST00000533464 RHOBP62745 196 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms