RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 APOHP02749 345 aaPredicted RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 CRHP06850 196 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 HCKP08631 526 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 HOXD4P09016 255 aaPredicted RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 CST2P09228 141 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 QDPRP09417 244 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PET100P0DJ07 73 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 COX6A1P12074 109 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 LIFP15018 202 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 ZNF250P15622 560 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PRKACBP22694 351 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 CPT2P23786 658 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PSMB6P28072 239 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 SRD5A2P31213 254 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 CSNK1A1P48729 337 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 STARP49675 285 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PRKXP51817 358 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 CLDN17P56750 224 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 ZNF121P58317 390 aaPredicted RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 MLF1P58340 268 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 CD81P60033 236 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 RPS18P62269 152 aaKnown RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 ZFP36L1Q07352 338 aaKnown RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 PPP1R1AQ13522 171 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 SNTB1Q13884 538 aaKnown RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 TMEM176BQ3YBM2 270 aaPredicted RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 SCGB2B2Q4G0G5 96 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PAN3Q58A45 887 aaKnown RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 IGSF11Q5DX21 431 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 RIPPLY2Q5TAB7 128 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 FAM27BQ5VT28 67 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR10K2Q6IF99 312 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 GUSBP11Q6P575 273 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 CORO6Q6QEF8 472 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 GLIPR1L1Q6UWM5 242 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 DRAM2Q6UX65 266 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 ABHD12BQ7Z5M8 362 aaPredicted RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 TMED4Q7Z7H5 227 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 WDFY1Q8IWB7 410 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 C20orf196Q8IYI0 205 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 ZNF100Q8IYN0 542 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 ZNF101Q8IZC7 436 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 MAML2Q8IZL2 1156 aaPredicted RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 TMEM123Q8N131 208 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 GBGT1Q8N5D6 347 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 INO80EQ8NBZ0 244 aaPredicted RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 ACBD4Q8NC06 268 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR10G3Q8NGC4 313 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR9K2Q8NGE7 335 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR5T2Q8NGG2 359 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR52H1Q8NGJ2 320 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR13C9Q8NGT0 318 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR2Y1Q8NGV0 311 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR4K15Q8NH41 348 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR1S1Q8NH92 325 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 COQ8AQ8NI60 647 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR51E1Q8TCB6 317 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 HAS2Q92819 552 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 SPTSSAQ969W0 71 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 NABP1Q96AH0 204 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 MRGPRFQ96AM1 343 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 SPSB1Q96BD6 273 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 MRPS24Q96EL2 167 aaKnown RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 FOXN4Q96NZ1 517 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 TECTBQ96PL2 329 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 OR5B2Q96R09 309 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 GAL3ST1Q99999 423 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PIGQQ9BRB3 760 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PDCD10Q9BUL8 212 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 EMC6Q9BV81 110 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 ZNF416Q9BWM5 594 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 SELENOIQ9C0D9 397 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 CHST5Q9GZS9 411 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 RGCCQ9H4X1 137 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 NARFLQ9H6Q4 476 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 SCRT2Q9NQ03 307 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 GPR84Q9NQS5 396 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 IL36GQ9NZH8 169 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PILRBQ9UKJ0 227 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 FARSAQ9Y285 508 aaKnown RBP3.17□□□□□ -1.9
CAST-242ENST00000515063 KCNK7Q9Y2U2 307 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 MEMO1Q9Y316 297 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 PKD1L2Q7Z442 2459 aa3.17□□□□□ -1.9
CAST-242ENST00000515063 EML6Q6ZMW3 1958 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 GON4LQ3T8J9 2241 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 ASCC3Q8N3C0 2202 aaKnown RBP3.16□□□□□ -1.9
CAST-242ENST00000515063 CABIN1Q9Y6J0 2220 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 A0A0A6YYD4 124 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 PIGBOS1A0A0B4J2F0 54 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 IGKV1-9A0A0C4DH69 117 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 LOC101059948A0A1B0GTJ6 334 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 LOC105371267A0A1B0GV96 52 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 A0A1W2PP11 408 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 OR2AT4A6NND4 320 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 MPTX1A8MV57 137 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 NPIPA2E9PIF3 369 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 NPIPA3F8WFD2 350 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 TMEM178BH3BS89 294 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 H3BSH0 61 aa3.16□□□□□ -1.9
CAST-242ENST00000515063 M0R135 149 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms