RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 NCOR1P1Q9H4R4 102 aa7.13□□□□□ -1.27
ITGB1-217ENST00000494395 ZMAT3Q9HA38 289 aaKnown RBP7.13□□□□□ -1.27
ITGB1-217ENST00000494395 C19orf73Q9NVV2 129 aa7.13□□□□□ -1.27
ITGB1-217ENST00000494395 NDUFB11Q9NX14 153 aa7.13□□□□□ -1.27
ITGB1-217ENST00000494395 ZNRD1Q9P1U0 126 aa7.13□□□□□ -1.27
ITGB1-217ENST00000494395 FBLN5Q9UBX5 448 aa7.13□□□□□ -1.27
ITGB1-217ENST00000494395 ING4Q9UNL4 249 aa7.13□□□□□ -1.27
ITGB1-217ENST00000494395 ST3GAL6Q9Y274 331 aa7.13□□□□□ -1.27
ITGB1-217ENST00000494395 UBE2J1Q9Y385 318 aaPredicted RBP7.13□□□□□ -1.27
ITGB1-217ENST00000494395 LRRC42Q9Y546 428 aa7.13□□□□□ -1.27
ITGB1-217ENST00000494395 X6R8D5 127 aa7.13□□□□□ -1.27
ITGB1-217ENST00000494395 DNHD1Q96M86 4753 aa7.13□□□□□ -1.27
ITGB1-217ENST00000494395 A0A1W2PRD5 423 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 A0A1W2PRF3 423 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 A0A1W2PRM7 423 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 ODAMA1E959 279 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 TMEM89A2RUT3 159 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A8PA6NJQ4 464 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 GEMIN2O14893 280 aaKnown RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 SLC22A1O15245 554 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 HOXA3O43365 443 aaPredicted RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 CSTBP04080 98 aaKnown RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 GTF2F2P13984 249 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 GDNFP39905 211 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 IER3P46695 156 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 COMPP49747 757 aaPredicted RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 MECP2P51608 486 aaKnown RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 QRFPP83859 136 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 SCN1BQ07699 218 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 BAMBIQ13145 260 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 GPR176Q14439 515 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 ATXN7L3Q14CW9 347 aaPredicted RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 C17orf58Q2M2W7 97 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 MPV17LQ2QL34 196 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 KCTD21Q4G0X4 260 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 SLC22A6Q4U2R8 563 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 MIDNQ504T8 468 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 HSD17B12Q53GQ0 312 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 PAN3Q58A45 887 aaKnown RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 ZNF626Q68DY1 528 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 AWAT2Q6E213 333 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 SIGIRRQ6IA17 410 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 ZNF773Q6PK81 442 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 RBMS3Q6XE24 437 aaKnown RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 ZNF782Q6ZMW2 699 aaPredicted RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 TMEM86BQ8N661 226 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 TMEM104Q8NE00 496 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 MRPS24Q96EL2 167 aaKnown RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 CYYR1Q96J86 154 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 HEXA-AS1Q9H8Q6 139 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 TCF7L1Q9HCS4 588 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 TAS2R3Q9NYW6 316 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 RCC2Q9P258 522 aaKnown RBP7.12□□□□□ -1.27
ITGB1-217ENST00000494395 POMT1Q9Y6A1 747 aa7.12□□□□□ -1.27
ITGB1-217ENST00000494395 ANK2Q01484 3957 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 hCG_1809904A0A1W2PP81 198 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 A0A1W2PPE2 198 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 A0A1W2PR64 198 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 A0A1W2PRV1 198 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FUOMA2VDF0 154 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A10PA6NDY2 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A18PA6NE21 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A16PA6NEW6 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A20PA6NIJ5 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A7PA6NKC0 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A22PA8MWA6 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A12PA8MX19 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A5PA8MXJ8 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A23PA8MXZ1 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 HSPB6O14558 160 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 CLPXO76031 633 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 OR7C1O76099 320 aaPredicted RBP7.11□□□□□ -1.27
ITGB1-217ENST00000494395 IGHV4-59P01825 116 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FBP1P09467 338 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A15PP0C7V4 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A13PP0C7W8 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A14PP0C7W9 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FAM90A24PP0C7X0 464 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 MGMTP16455 207 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 GALP22466 123 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 CD34P28906 385 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 KCNJ3P48549 501 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 TAF9Q16594 264 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 KRBOX4Q5JUW0 171 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 GLT8D1Q68CQ7 371 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 BAIAP2L2Q6UXY1 529 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 HEPN1Q6WQI6 88 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 GAPTQ8N292 157 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 SUMF2Q8NBJ7 301 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 OR11H6Q8NGC7 330 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 OR13A1Q8NGR1 328 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 SSMEM1Q8WWF3 244 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FCGR1BQ92637 280 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 SLC25A28Q96A46 364 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 FOXRED1Q96CU9 486 aaPredicted RBP7.11□□□□□ -1.27
ITGB1-217ENST00000494395 S100A13Q99584 98 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 DPCDQ9BVM2 203 aaPredicted RBP7.11□□□□□ -1.27
ITGB1-217ENST00000494395 MEGF9Q9H1U4 602 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 KCNK15Q9H427 330 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 BANF2Q9H503 90 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms