RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 Q8NFD4 153 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 OR5T2Q8NGG2 359 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 OR6Q1Q8NGQ2 317 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 NEK7Q8TDX7 302 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 TM2D1Q9BX74 207 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 ABCG5Q9H222 651 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 MIXL1Q9H2W2 232 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 FBXL7Q9UJT9 491 aa10.07□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A10PA6NDY2 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A18PA6NE21 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A16PA6NEW6 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A20PA6NIJ5 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A8PA6NJQ4 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A7PA6NKC0 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A22PA8MWA6 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A12PA8MX19 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A5PA8MXJ8 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A23PA8MXZ1 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.06□□□□□ -0.8
UPF3A-210ENST00000493727 HSPB6O14558 160 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FSTL3O95633 263 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 GYPAP02724 150 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 CHRM2P08172 466 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A15PP0C7V4 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A13PP0C7W8 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A14PP0C7W9 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM90A24PP0C7X0 464 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 PSG2P11465 335 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 CDK2P24941 298 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 BLVRBP30043 206 aaPredicted RBP10.06□□□□□ -0.8
UPF3A-210ENST00000493727 PRDX2P32119 198 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 MDH2P40926 338 aaKnown RBP10.06□□□□□ -0.8
UPF3A-210ENST00000493727 HILS1P60008 231 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 ACTG1P63261 375 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 MADCAM1Q13477 382 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 ZNF146Q15072 292 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 ZMYND11Q15326 602 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 SPANXN2Q5MJ10 180 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 TMEM69Q5SWH9 247 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 DCAF12L2Q5VW00 463 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 TEX36Q5VZQ5 186 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 IZUMO1Q8IYV9 350 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 Q8N1Y9 231 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 MUC20Q8N307 709 aaPredicted RBP10.06□□□□□ -0.8
UPF3A-210ENST00000493727 DTX3Q8N9I9 347 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 ASCC1Q8N9N2 400 aaKnown RBP10.06□□□□□ -0.8
UPF3A-210ENST00000493727 OR4M1Q8NGD0 313 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 OR10R2Q8NGX6 335 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 SGMS2Q8NHU3 365 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 NANPQ8TBE9 248 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 FAM216AQ8WUB2 273 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 SUCNR1Q9BXA5 334 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 SPACA1Q9HBV2 294 aa10.06□□□□□ -0.8
UPF3A-210ENST00000493727 MRPS7Q9Y2R9 242 aaKnown RBP10.06□□□□□ -0.8
UPF3A-210ENST00000493727 TRAV18A0A075B6X5 111 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 A0A0A6YYD4 124 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 A0A0A6YYH2 397 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 TMEM89A2RUT3 159 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 A6NJ64 397 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 SOCS1O15524 211 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 NDUFA2O43678 99 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 PDCD6O75340 191 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 OR2H2O95918 312 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 TFF1P04155 84 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 TNFSF8P32971 234 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 RPL11P62913 178 aaKnown RBP10.05□□□□□ -0.8
UPF3A-210ENST00000493727 COL10A1Q03692 680 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 IL18Q14116 193 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 MOGAT2Q3SYC2 334 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 PAN3Q58A45 887 aaKnown RBP10.05□□□□□ -0.8
UPF3A-210ENST00000493727 STUMQ69YW2 141 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 BAIAP2L2Q6UXY1 529 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 Q6ZTK2 550 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 SPICQ8N5J4 248 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 PPP1R35Q8TAP8 253 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 RAB3CQ96E17 227 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 WDFY2Q96P53 400 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 CCL13Q99616 98 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 PLEKHJ1Q9NW61 149 aa10.05□□□□□ -0.8
UPF3A-210ENST00000493727 IGKV1D-17A0A075B6S4 117 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 LOC105371242A0A075B767 164 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 PPIAL4CA0A0B4J2A2 164 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 FABP12A6NFH5 140 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 MCRIP1C9JLW8 97 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 ADAM20O43506 726 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 XRCC3O43542 346 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 FOXH1O75593 365 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 IGHV2-70P01814 119 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 FUT3P21217 361 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 FPR2P25090 351 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 MNDAP41218 407 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 TAS2R20P59543 309 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 MRPS15P82914 257 aaKnown RBP10.04□□□□□ -0.8
UPF3A-210ENST00000493727 ARL6IP1Q15041 203 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 FAM131AQ6UXB0 335 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 DCDC5Q6ZRR9 648 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 SLC36A1Q7Z2H8 476 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 BPIFB2Q8N4F0 458 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 FAM89BQ8N5H3 189 aa10.04□□□□□ -0.8
UPF3A-210ENST00000493727 CD177Q8N6Q3 437 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms