RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 PRB1P04280 392 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 PSG7Q13046 419 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 PPA1Q15181 289 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 CLEC9AQ6UXN8 241 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 OR10AD1Q8NGE0 317 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 TERB2Q8NHR7 220 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 HIST1H2AAQ96QV6 131 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 TSNAXQ99598 290 aaKnown RBP10.34□□□□□ -0.75
HDAC6-230ENST00000488543 SULT4A1Q9BR01 284 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 RTBDNQ9BSG5 229 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-230ENST00000488543 FAAP24Q9BTP7 215 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 CYTL1Q9NRR1 136 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 PLEKHJ1Q9NW61 149 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 AK3Q9UIJ7 227 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 SPTBN1Q01082 2364 aaKnown RBP10.34□□□□□ -0.75
HDAC6-230ENST00000488543 ICE1Q9Y2F5 2266 aa10.34□□□□□ -0.75
HDAC6-230ENST00000488543 IGHV2OR16-5A0A0B4J2B6 119 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 J3KRW8 73 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 GNG3P63215 75 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 ADORA2A-AS1P86434 159 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 VAX1Q5SQQ9 334 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 TMEM211Q6ICI0 200 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 WDR86Q86TI4 376 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 TMEM17Q86X19 198 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 KLF14Q8TD94 323 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-230ENST00000488543 SAV1Q9H4B6 383 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-230ENST00000488543 RAB32Q13637 225 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 PDCD1Q15116 288 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 TIMM23BQ5SRD1 257 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 LDLRAD3Q86YD5 345 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 OR4A4PQ8NGN8 299 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 OR5H2Q8NGV7 314 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 DYRK2Q92630 601 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 PARP12Q9H0J9 701 aaKnown RBP10.33□□□□□ -0.76
HDAC6-230ENST00000488543 OR51I2Q9H344 312 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 METTL8Q9H825 291 aaKnown RBP10.33□□□□□ -0.76
HDAC6-230ENST00000488543 PCDHB16Q9NRJ7 776 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 ZNF701Q9NV72 531 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-230ENST00000488543 EHFQ9NZC4 300 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 GPR132Q9UNW8 380 aa10.33□□□□□ -0.76
HDAC6-230ENST00000488543 NKX2-6A6NCS4 301 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 C16orf97H3BN30 126 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 M0R1B8 84 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 AGPAT2O15120 278 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 SNAPC5O75971 98 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 HLA-GP17693 338 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 GRNP28799 593 aaKnown RBP10.32□□□□□ -0.76
HDAC6-230ENST00000488543 SNU13P55769 128 aaKnown RBP10.32□□□□□ -0.76
HDAC6-230ENST00000488543 FGF12P61328 243 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 ACTBL2Q562R1 376 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 AADACL3Q5VUY0 350 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 HAGHLQ6PII5 290 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-230ENST00000488543 BRICD5Q6PL45 260 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 MKXQ8IYA7 352 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 ASB13Q8WXK3 278 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 MUCL1Q96DR8 90 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 IL36RNQ9UBH0 155 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A27PA6NNH2 459 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 PDCD6O75340 191 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 ATG12O94817 140 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 GNLYP22749 145 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 TLE1Q04724 770 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 TMEM128Q5BJH2 165 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 ZNF573Q86YE8 665 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 CLRN3Q8NCR9 226 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 ZNF488Q96MN9 340 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 PKIBQ9C010 78 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 TLNRD1Q9H1K6 362 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 HRH4Q9H3N8 390 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 GLS2Q9UI32 602 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 FZR1Q9UM11 496 aa10.32□□□□□ -0.76
HDAC6-230ENST00000488543 TMEM218A2RU14 115 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A10PA6NDY2 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A18PA6NE21 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A16PA6NEW6 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A20PA6NIJ5 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A8PA6NJQ4 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A7PA6NKC0 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A22PA8MWA6 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A12PA8MX19 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A5PA8MXJ8 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A23PA8MXZ1 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 SFT2D2O95562 160 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A15PP0C7V4 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A13PP0C7W8 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A14PP0C7W9 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM90A24PP0C7X0 464 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 SELEP16581 610 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 NAAAQ02083 359 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 IL24Q13007 206 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FAM76BQ5HYJ3 339 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 ANAPC16Q96DE5 110 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 AIFM2Q9BRQ8 373 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 SMIM3Q9BZL3 60 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 TREM1Q9NP99 234 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 PURGQ9UJV8 347 aaKnown RBP10.31□□□□□ -0.76
HDAC6-230ENST00000488543 TEX13DA0A0J9YY54 714 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-230ENST00000488543 ZNF705EA8MWA4 302 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-230ENST00000488543 C3orf80F5H4A9 247 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 H0YL77 283 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms