RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PTPRKQ15262 1439 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 PCF11O94913 1555 aaKnown RBP3.17□□□□□ -1.9
PTCD3-214ENST00000483925 C5orf49A4QMS7 147 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 BTNL10A8MVZ5 291 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 DISC1C4P0D8 188 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 C9JQL5 133 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 CD5LO43866 347 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 CA11O75493 328 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 CD5P06127 495 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 OR5G3P0C626 314 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 CBR1P16152 277 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 CDK9P50750 372 aaKnown RBP3.17□□□□□ -1.9
PTCD3-214ENST00000483925 RAB4BP61018 213 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 HIST1H3AP68431 136 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 H3F3AP84243 136 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 TRMT12Q53H54 448 aaKnown RBP3.17□□□□□ -1.9
PTCD3-214ENST00000483925 MPV17L2Q567V2 206 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 CENPWQ5EE01 88 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 ELP2Q6IA86 826 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 FAM71E1Q6IPT2 247 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 SFXN4Q6P4A7 337 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 HIST2H3AQ71DI3 136 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 VN1R4Q7Z5H5 301 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 LINC00596Q86U02 117 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 MYPOPQ86VE0 399 aaPredicted RBP3.17□□□□□ -1.9
PTCD3-214ENST00000483925 C1orf158Q8N1D5 194 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 SUMF2Q8NBJ7 301 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 OR52P1PQ8NH57 321 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 SPPL2BQ8TCT7 592 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 SLC35B4Q969S0 331 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 ZNF689Q96CS4 500 aaPredicted RBP3.17□□□□□ -1.9
PTCD3-214ENST00000483925 DCUN1D1Q96GG9 259 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 SLC35G5Q96KT7 338 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 OLFM3Q96PB7 478 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 OR52E6Q96RD3 313 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 CHAC1Q9BUX1 264 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 SLC17A9Q9BYT1 436 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 EIF5A2Q9GZV4 153 aaKnown RBP3.17□□□□□ -1.9
PTCD3-214ENST00000483925 TXNIPQ9H3M7 391 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 ZSCAN16Q9H4T2 348 aaPredicted RBP3.17□□□□□ -1.9
PTCD3-214ENST00000483925 HES4Q9HCC6 221 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 DOK5Q9P104 306 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 RBM12B-AS1Q9P1G2 102 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 HHLA2Q9UM44 414 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 C14orf166Q9Y224 244 aaKnown RBP3.17□□□□□ -1.9
PTCD3-214ENST00000483925 POMPQ9Y244 141 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 YTHDF2Q9Y5A9 579 aaKnown RBP3.17□□□□□ -1.9
PTCD3-214ENST00000483925 LRRK1Q38SD2 2015 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 NACADO15069 1562 aa3.17□□□□□ -1.9
PTCD3-214ENST00000483925 CAMSAP1Q5T5Y3 1602 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 IGHV1OR15-9A0A0B4J2B8 117 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 A0A1B0GV50 99 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 LOC105371267A0A1B0GV96 52 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 TMEM72A0PK05 275 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 PQLC2LA1A4F0 135 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 EVPLLA8MZ36 301 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 KLLNB2CW77 178 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 TRIM49D1C9J1S8 452 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 C15orf65H3BRN8 121 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 CHST10O43529 356 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 TCF21O43680 179 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 PI15O43692 258 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 KLRC4O43908 158 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 SCO1O75880 301 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 INSP01308 110 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 ATP5G1P05496 136 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 SOD3P08294 240 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 CD36P16671 472 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 CXCL2P19875 107 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 IMPA1P29218 277 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 RBMXP38159 391 aaKnown RBP3.16□□□□□ -1.9
PTCD3-214ENST00000483925 S100A12P80511 92 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 HPCAP84074 193 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 IFITM2Q01629 132 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 ZNF239Q16600 458 aaKnown RBP3.16□□□□□ -1.9
PTCD3-214ENST00000483925 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 FAM222AQ5U5X8 452 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 CEND1Q8N111 149 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 TMEM86BQ8N661 226 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 ZIC4Q8N9L1 334 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 COQ8AQ8NI60 647 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 C15orf40Q8WUR7 153 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 YIPF5Q969M3 257 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 SLC35E1Q96K37 410 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 OR7D2Q96RA2 312 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 SIGMAR1Q99720 223 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 HOPXQ9BPY8 73 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-214ENST00000483925 TMEM109Q9BVC6 243 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 KIFC1Q9BW19 673 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 GGTLC1Q9BX51 225 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 PCBD2Q9H0N5 130 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 DCSTAMPQ9H295 470 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 CDC42EP4Q9H3Q1 356 aaKnown RBP3.16□□□□□ -1.9
PTCD3-214ENST00000483925 SLC7A10Q9NS82 523 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 PAK5Q9P286 719 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 ZNF225Q9UK10 706 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 HDGFL3Q9Y3E1 203 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 SLC22A7Q9Y694 548 aa3.16□□□□□ -1.9
PTCD3-214ENST00000483925 PRSS21Q9Y6M0 314 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms