RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 OTUB2Q96DC9 234 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 GLT1D1Q96MS3 346 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 YPEL4Q96NS1 127 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 CIB1Q99828 191 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 COPS4Q9BT78 406 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 TXNIPQ9H3M7 391 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 CYB5R1Q9UHQ9 305 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 NAGKQ9UJ70 344 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 SCRIBQ14160 1630 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 NLRC5Q86WI3 1866 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 IGHV3-21A0A0B4J1V1 117 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 LOC105371267A0A1B0GV96 52 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 MYBPHLA2RUH7 354 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 ZNF729A6NN14 1252 aaPredicted RBP2.57□□□□□ -2
SF3B1-210ENST00000482158 A8MWP4 228 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 GOLGA8KD6RF30 607 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 RGS5O15539 181 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 RPP14O95059 124 aaKnown RBP2.57□□□□□ -2
SF3B1-210ENST00000482158 IGHMP01871 453 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 CECR9P0C854 216 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 CFL1P23528 166 aaKnown RBP2.57□□□□□ -2
SF3B1-210ENST00000482158 MSNP26038 577 aaKnown RBP2.57□□□□□ -2
SF3B1-210ENST00000482158 DNASE1L1P49184 302 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 RAB38P57729 211 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 GLO1Q04760 184 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 UBE2NLQ5JXB2 153 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 TMEM215Q68D42 235 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 MARCH3Q86UD3 253 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 GTF2H4Q92759 462 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 CCDC124Q96CT7 223 aaKnown RBP2.57□□□□□ -2
SF3B1-210ENST00000482158 OR51V1Q9H2C8 321 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 PLEKHA1Q9HB21 404 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 MRPL40Q9NQ50 206 aaKnown RBP2.57□□□□□ -2
SF3B1-210ENST00000482158 DNAJC27Q9NZQ0 273 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 NCOA3Q9Y6Q9 1424 aa2.57□□□□□ -2
SF3B1-210ENST00000482158 A0A1B0GW15 77 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 hCG_2039718K7EN88 272 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 CYTH3O43739 400 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 CIAO1O76071 339 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 SERPINA6P08185 405 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 SOD3P08294 240 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 PRPS1L1P21108 318 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 CDKN2CP42773 168 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 RANBP1P43487 201 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 LGALS7P47929 136 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 GCLMP48507 274 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 OR2B6P58173 313 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 ACTBP60709 375 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 RAB14P61106 215 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 ACTG1P63261 375 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 BNIP2Q12982 314 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 STX5Q13190 355 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 ZNF141Q15928 474 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 PYDC2Q56P42 97 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 COQ5Q5HYK3 327 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 TTC33Q6PID6 262 aaPredicted RBP2.56□□□□□ -2
SF3B1-210ENST00000482158 Q6ZT83 130 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 RPRMLQ8N4K4 120 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 SPICQ8N5J4 248 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 TEX47Q8TBZ9 253 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 C2orf15Q8WU43 125 aaKnown RBP2.56□□□□□ -2
SF3B1-210ENST00000482158 TMA16Q96EY4 203 aaKnown RBP2.56□□□□□ -2
SF3B1-210ENST00000482158 IGF2BP2-AS1Q96M15 143 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 ZNF75AQ96N20 296 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 BIRC8Q96P09 236 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 CENPHQ9H3R5 247 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 METTL8Q9H825 291 aaKnown RBP2.56□□□□□ -2
SF3B1-210ENST00000482158 C8orf4Q9NR00 106 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 IMP3Q9NV31 184 aaKnown RBP2.56□□□□□ -2
SF3B1-210ENST00000482158 NXT1Q9UKK6 140 aaKnown RBP2.56□□□□□ -2
SF3B1-210ENST00000482158 NRCAMQ92823 1304 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 FHAD1B1AJZ9 1412 aa2.56□□□□□ -2
SF3B1-210ENST00000482158 CD300LBA8K4G0 201 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 F5H5P2 479 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 RNASEK-C17orf49H0YIS7 233 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 GOLGA6L19H0YKK7 550 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 SMLR1H3BR10 107 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 TOX3O15405 576 aaPredicted RBP2.55□□□□□ -2
SF3B1-210ENST00000482158 IGHV3-53P01767 116 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 CNTFRP26992 372 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 LRPPRCP42704 1394 aaKnown RBP2.55□□□□□ -2
SF3B1-210ENST00000482158 CCL23P55773 120 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 ROCK1Q13464 1354 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 ALX1Q15699 326 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 GOLGA7BQ2TAP0 167 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 PLEKHG7Q6ZR37 379 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 DPPA2Q7Z7J5 298 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 LY6G5BQ8NDX9 201 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 OR6K3Q8NGY3 331 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 OR2AE1Q8NHA4 323 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 MUC7Q8TAX7 377 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 ZCCHC13Q8WW36 166 aaKnown RBP2.55□□□□□ -2
SF3B1-210ENST00000482158 MAL2Q969L2 176 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 RAD51AP1Q96B01 352 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 C7orf50Q9BRJ6 194 aaKnown RBP2.55□□□□□ -2
SF3B1-210ENST00000482158 DRC3Q9H069 523 aa2.55□□□□□ -2
SF3B1-210ENST00000482158 MRM2Q9UI43 246 aaKnown RBP2.55□□□□□ -2
SF3B1-210ENST00000482158 ZNF443Q9Y2A4 671 aaPredicted RBP2.55□□□□□ -2
SF3B1-210ENST00000482158 SAMHD1Q9Y3Z3 626 aaKnown RBP2.55□□□□□ -2
SF3B1-210ENST00000482158 TRAPPC1Q9Y5R8 145 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms