RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-205	ENST00000472223	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.96	□□□□□ -0.17
CCM2-205	ENST00000472223		A0A096LNT2	108 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	TMEM235	A6NFC5	223 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	TGFA	P01135	160 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	MT-ND4	P03905	459 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	GLP1R	P43220	463 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	CBX5	P45973	191 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	DCAF12L2	Q5VW00	463 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	PYHIN1	Q6K0P9	492 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	FAM131A	Q6UXB0	335 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	MOB1B	Q7L9L4	216 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	BIVM	Q86UB2	503 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	TPRX1	Q8N7U7	411 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	OR6Q1	Q8NGQ2	317 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	PLPPR1	Q8TBJ4	325 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	CCDC107	Q8WV48	283 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	COQ2	Q96H96	371 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	C1orf159	Q96HA4	380 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	C18orf12	Q96KH6	178 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	AUNIP	Q9H7T9	357 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	LINC00312	Q9Y6C7	94 aa		13.95	□□□□□ -0.18
CCM2-205	ENST00000472223	SETX	Q7Z333	2677 aa	Known RBP	13.95	□□□□□ -0.18
CCM2-205	ENST00000472223		A0A0G2JMP0	313 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223		A0A0X1KG70	313 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	ZFP36	P26651	326 aa	Known RBP	13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	MRPS10	P82664	201 aa	Known RBP	13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	TMEM200B	Q69YZ2	307 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	LINC00299	Q6ZSB3	139 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	SNX29P2	Q8IUI4	249 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	FGFRL1	Q8N441	504 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	OR4M2	Q8NGB6	313 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	OR4K15	Q8NH41	348 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	C8orf46	Q8TAG6	207 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	TMEM186	Q96B77	213 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	ZNF714	Q96N38	554 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	IFT46	Q9NQC8	304 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	C19orf12	Q9NSK7	152 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	TAS2R3	Q9NYW6	316 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	ONECUT1	Q9UBC0	465 aa		13.94	□□□□□ -0.18
CCM2-205	ENST00000472223	MALRD1	Q5VYJ5	2156 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	IGHV2-70D	A0A0C4DH43	119 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	KIR2DS1	A0A191URI9	304 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	SPINT2	O43291	252 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	MELTF	P08582	738 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	IGHV4-31	P0DP07	118 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	CD99	P14209	185 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	METTL11B	Q5VVY1	283 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	FCAMR	Q8WWV6	532 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	DYRK2	Q92630	601 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	CORO2A	Q92828	525 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	MSI2	Q96DH6	328 aa	Known RBP	13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	COX4I2	Q96KJ9	171 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	SCPEP1	Q9HB40	452 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	HIF1AN	Q9NWT6	349 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	OPN4	Q9UHM6	478 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	KCNK7	Q9Y2U2	307 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	MYO9A	B2RTY4	2548 aa		13.93	□□□□□ -0.18
CCM2-205	ENST00000472223	ZNF729	A6NN14	1252 aa	Predicted RBP	13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	C22orf46	C9J442	243 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	SULT1C2	O00338	296 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	FOSL1	P15407	271 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	DTYMK	P23919	212 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	PTBP1	P26599	531 aa	Known RBP eCLIP	13.92	□□□□□ -0.18	9e-9	■■■■■ 35.7
CCM2-205	ENST00000472223	DVL1P1	P54792	670 aa	Predicted RBP	13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	MADCAM1	Q13477	382 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	OLFML2A	Q68BL7	652 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	ZNF554	Q86TJ5	538 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	CIART	Q8N365	385 aa	Predicted RBP	13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	LY6G5B	Q8NDX9	201 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	MRPL30	Q8TCC3	161 aa	Known RBP	13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	MRGPRD	Q8TDS7	321 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	S100Z	Q8WXG8	99 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	FAHD2A	Q96GK7	314 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	ST6GALNAC5	Q9BVH7	336 aa		13.92	□□□□□ -0.18
CCM2-205	ENST00000472223	CR1	P17927	2039 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	TRBV6-6	A0A0A6YYG2	114 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223		M0R1W7	72 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	ORC5	O43913	435 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	NAPSA	O96009	420 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	HLA-DQB1	P01920	261 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	LPL	P06858	475 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	INHBB	P09529	407 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	ZNF728	P0DKX0	622 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	KIR2DS4	P43632	304 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	ARF6	P62330	175 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	ZNF45	Q02386	682 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	KIR2DS1	Q14954	304 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	PYDC2	Q56P42	97 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	GAPT	Q8N292	157 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	KIR3DL3	Q8N743	410 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	NUDCD2	Q8WVJ2	157 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	ARL11	Q969Q4	196 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	ZNF286A	Q9HBT8	521 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	KCNS2	Q9ULS6	477 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	INSIG2	Q9Y5U4	225 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	KPTN	Q9Y664	436 aa		13.91	□□□□□ -0.18
CCM2-205	ENST00000472223	ITPR3	Q14573	2671 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms