RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 CCL16O15467 120 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 REM1O75628 298 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 IGLV3-25P01717 112 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 PMP2P02689 132 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 FGF1P05230 155 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 RFPL3SP0C7P2 107 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 SDC1P18827 310 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 EDDM3AQ14507 147 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 HMGN3Q15651 99 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 WDR74Q6RFH5 385 aaPredicted RBP6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 DNM1P46Q6ZS02 220 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 OR4D9Q8NGE8 314 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 OR10D4PQ8NGN7 298 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 F2RL3Q96RI0 385 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 SNHG12Q9BXW3 62 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 MAP1LC3AQ9H492 121 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 MSL2Q9HCI7 577 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 VPS29Q9UBQ0 182 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 FLVCR1Q9Y5Y0 555 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 F5P12259 2224 aa6.56□□□□□ -1.36
SPTBN1-204ENST00000467371 SULT1A1P50225 295 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 SULT1A2P50226 295 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 FAM53BQ14153 422 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 ATXN7L3Q14CW9 347 aaPredicted RBP6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 DMRTC1Q5HYR2 192 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 GLT8D1Q68CQ7 371 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 ZNF547Q8IVP9 402 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 HIST3H2BBQ8N257 126 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 DUSP23Q9BVJ7 150 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 SPANXA1Q9NS26 97 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 TMED3Q9Y3Q3 217 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 RBM7Q9Y580 266 aaKnown RBP6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 FRMPD3Q5JV73 1810 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 GGT3PA6NGU5 568 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 SP1P08047 785 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 PLA2G7Q13093 441 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 GINS1Q14691 196 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 CDSNQ15517 529 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 OR1C1Q15619 314 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 ELAVL1Q15717 326 aaKnown RBP6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 SLC25A35Q3KQZ1 300 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 RNASE12Q5GAN4 147 aaKnown RBP6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 ARTNQ5T4W7 220 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 AGBL4Q5VU57 503 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 HEPN1Q6WQI6 88 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 MBOAT2Q6ZWT7 520 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 GPR119Q8TDV5 335 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 MAL2Q969L2 176 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 TVP23BQ9NYZ1 205 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 DOK5Q9P104 306 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 J3QRE1 110 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 SAP18O00422 153 aaKnown RBP6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 SOX14O95416 240 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 ATP1B1P05026 303 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 CRYGDP07320 174 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 CLRN1P58418 232 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 DEFB103AP81534 67 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 LIAT1Q6ZQX7 453 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 PAQR4Q8N4S7 273 aaPredicted RBP6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 OR4X1Q8NH49 305 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 UBE2E3Q969T4 207 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 GALNT14Q96FL9 552 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 SMIM8Q96KF7 97 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 S100A13Q99584 98 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 ZNF471Q9BX82 626 aaPredicted RBP6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 MEPEQ9NQ76 525 aaPredicted RBP6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 CALML5Q9NZT1 146 aa6.55□□□□□ -1.36
SPTBN1-204ENST00000467371 A0A087WX48 190 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 ZNF705EA8MWA4 302 aaPredicted RBP6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 FAAHO00519 579 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 FOXH1O75593 365 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 CPSF4O95639 269 aaKnown RBP6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 HLA-DQA2P01906 255 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 STATHP02808 62 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 CD14P08571 375 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 ESDP10768 282 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 HIST1H1TP22492 207 aaPredicted RBP6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 TGIF1Q15583 401 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 RTL6Q6ICC9 239 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 C11orf87Q6NUJ2 197 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 ZNF322Q6U7Q0 402 aaPredicted RBP6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 ZNF614Q8N883 585 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 OR10AD1Q8NGE0 317 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 OR5AP2Q8NGF4 316 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 APOBEC3DQ96AK3 386 aaPredicted RBP6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 Q9Y3F1 56 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 HS3ST3B1Q9Y662 390 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 CKAP5Q14008 2032 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 C7orf77A4D0Y5 90 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 FAM183AA6NL82 134 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 PHF1O43189 567 aaPredicted RBP6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 CDC40O60508 579 aaKnown RBP eCLIP6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 OPN1SWP03999 348 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 FCGR3AP08637 254 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 CD70P32970 193 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 OPRD1P41143 372 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 DLX6P56179 175 aa6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 RPL31P62899 125 aaKnown RBP6.54□□□□□ -1.36
SPTBN1-204ENST00000467371 KHDC3LQ587J8 217 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms