RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 ZNF250P15622 560 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 LMO1P25800 156 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 GLRXP35754 106 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 SRPXP78539 464 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 GGNBP1Q5YKI7 109 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 PCSK4Q6UW60 755 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 GFRALQ6UXV0 394 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 LDLRAD3Q86YD5 345 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 GLYATL2Q8WU03 294 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 MSL2Q9HCI7 577 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 GSKIPQ9P0R6 139 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 TUBD1Q9UJT1 453 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 FBXO9Q9UK97 447 aaPredicted RBP17.33■□□□□ 0.37
CCDC78-207ENST00000466708 ZNF835Q9Y2P0 537 aa17.33■□□□□ 0.37
CCDC78-207ENST00000466708 SPTBN2O15020 2390 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 A6NLC8 198 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 NPIPB11E5RHQ5 1161 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 C3orf80F5H4A9 247 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 H0YIZ8 118 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 GPR31O00270 319 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 HAND1O96004 215 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 RCC1P18754 421 aaPredicted RBP17.33■□□□□ 0.36
CCDC78-207ENST00000466708 BMP5P22003 454 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 NUP62P37198 522 aaPredicted RBP17.33■□□□□ 0.36
CCDC78-207ENST00000466708 UCNP55089 124 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 TMPRSS3P57727 454 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 SP6Q3SY56 376 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 C6orf183Q5T699 404 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 WDR82Q6UXN9 313 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 OR11L1Q8NGX0 322 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 OR10J5Q8NHC4 309 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 MSI2Q96DH6 328 aaKnown RBP17.33■□□□□ 0.36
CCDC78-207ENST00000466708 DNAJB11Q9UBS4 358 aa17.33■□□□□ 0.36
CCDC78-207ENST00000466708 IGHV3-64DA0A0J9YX35 117 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 IGHV3-13P01766 116 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 RAB32Q13637 225 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 ESCO2Q56NI9 601 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 ALKAL2Q6UX46 152 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 PRR7Q8TB68 274 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 PLPPR1Q8TBJ4 325 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 SECTM1Q8WVN6 248 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 ST8SIA2Q92186 375 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 MRPL24Q96A35 216 aaKnown RBP17.32■□□□□ 0.36
CCDC78-207ENST00000466708 KIRREL1Q96J84 757 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 CITED4Q96RK1 184 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 SLC5A7Q9GZV3 580 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 ELOVL5Q9NYP7 299 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 TAAR3PQ9P1P4 343 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 WIPI2Q9Y4P8 454 aa17.32■□□□□ 0.36
CCDC78-207ENST00000466708 C3orf85A0A1B0GTC6 90 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 LEUTXA8MZ59 168 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 SPDEFO95238 335 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 RPS23P62266 143 aaKnown RBP17.31■□□□□ 0.36
CCDC78-207ENST00000466708 NKX6-1P78426 367 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-207ENST00000466708 ACP7Q6ZNF0 438 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 ZNF826PQ6ZT77 177 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 C18orf12Q96KH6 178 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 ARPC5LQ9BPX5 153 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 MBNL3Q9NUK0 354 aaKnown RBP17.31■□□□□ 0.36
CCDC78-207ENST00000466708 TRAPPC2LQ9UL33 140 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 OR2W1Q9Y3N9 320 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 A0A0G2JNJ9 132 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 PHF1O43189 567 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-207ENST00000466708 CD200P41217 278 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 FAM27E3Q08E93 113 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 PRAMEF6Q5VXH4 476 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 C5orf24Q7Z6I8 188 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 CMTM1Q8IZ96 169 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 H1FOOQ8IZA3 346 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-207ENST00000466708 CNTNAP3BQ96NU0 1288 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 CNTNAP3Q9BZ76 1288 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 Q9UFV3 132 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 OR14J1Q9UGF5 321 aa17.31■□□□□ 0.36
CCDC78-207ENST00000466708 IFNL4K9M1U5 179 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 PTBP3O95758 552 aaKnown RBP17.3■□□□□ 0.36
CCDC78-207ENST00000466708 KLF3P57682 345 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-207ENST00000466708 SMIM21Q3B7S5 101 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 BEX5Q5H9J7 111 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 ALKBH2Q6NS38 261 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 ZNF818PQ6ZRF7 136 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 SNRNP40Q96DI7 357 aaKnown RBP17.3■□□□□ 0.36
CCDC78-207ENST00000466708 PHYHIPLQ96FC7 376 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 AQP10Q96PS8 301 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 ZNF471Q9BX82 626 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-207ENST00000466708 TMEM222Q9H0R3 208 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 OR5AC2Q9NZP5 309 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 DUSP13Q9UII6 198 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 TMED3Q9Y3Q3 217 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 BOD1L1Q8NFC6 3051 aa17.3■□□□□ 0.36
CCDC78-207ENST00000466708 SPENQ96T58 3664 aaKnown RBP17.29■□□□□ 0.36
CCDC78-207ENST00000466708 IGKV1D-13A0A0B4J2D9 117 aa17.29■□□□□ 0.36
CCDC78-207ENST00000466708 RLN2P04090 185 aa17.29■□□□□ 0.36
CCDC78-207ENST00000466708 IGKV1-13P0DP09 117 aa17.29■□□□□ 0.36
CCDC78-207ENST00000466708 S100GP29377 79 aa17.29■□□□□ 0.36
CCDC78-207ENST00000466708 SSX8Q7RTT4 187 aa17.29■□□□□ 0.36
CCDC78-207ENST00000466708 TP53RKQ96S44 253 aa17.29■□□□□ 0.36
CCDC78-207ENST00000466708 ZFP57Q9NU63 452 aa17.29■□□□□ 0.36
CCDC78-207ENST00000466708 RRASP10301 218 aa17.28■□□□□ 0.36
CCDC78-207ENST00000466708 S100A10P60903 97 aa17.28■□□□□ 0.36
CCDC78-207ENST00000466708 RBPJQ06330 500 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms