RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 NRIP2Q9BQI9 281 aa12.67□□□□□ -0.38
IFT140-204ENST00000439987 CXXC4Q9H2H0 198 aa12.67□□□□□ -0.38
IFT140-204ENST00000439987 C5orf66Q9H5L9 145 aa12.67□□□□□ -0.38
IFT140-204ENST00000439987 MSL2Q9HCI7 577 aa12.67□□□□□ -0.38
IFT140-204ENST00000439987 NECAP2Q9NVZ3 263 aa12.67□□□□□ -0.38
IFT140-204ENST00000439987 ATRXP46100 2492 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 A0A1B0GWJ7 208 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 OR5H14A6NHG9 310 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 OR5H8P0DN80 308 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 AKR1C4P17516 323 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 TAS2R31P59538 309 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 NKX6-1P78426 367 aaPredicted RBP12.66□□□□□ -0.38
IFT140-204ENST00000439987 MSMPQ1L6U9 139 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 NARS2Q96I59 477 aaKnown RBP12.66□□□□□ -0.38
IFT140-204ENST00000439987 VKORC1Q9BQB6 163 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 MBD2Q9UBB5 411 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 POLEQ07864 2286 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 C9orf170A2RU37 121 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 NAPSAO96009 420 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 PVALBP20472 110 aaPredicted RBP12.66□□□□□ -0.38
IFT140-204ENST00000439987 GLRXP35754 106 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 IL13RA1P78552 427 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 ZNF345Q14585 488 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 SURF2Q15527 256 aaPredicted RBP12.66□□□□□ -0.38
IFT140-204ENST00000439987 SLC22A25Q6T423 547 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 ZNF546Q86UE3 836 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 SUMF2Q8NBJ7 301 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 TMEM185AQ8NFB2 350 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 RND1Q92730 232 aa12.66□□□□□ -0.38
IFT140-204ENST00000439987 ZNF2Q9BSG1 426 aaPredicted RBP12.66□□□□□ -0.38
IFT140-204ENST00000439987 CHMP1AQ9HD42 196 aaPredicted RBP12.66□□□□□ -0.38
IFT140-204ENST00000439987 KANTRA0A1W2PQU2 76 aa12.65□□□□□ -0.38
IFT140-204ENST00000439987 HSPB6O14558 160 aa12.65□□□□□ -0.38
IFT140-204ENST00000439987 OR2F2O95006 317 aa12.65□□□□□ -0.38
IFT140-204ENST00000439987 ACAA1P09110 424 aaPredicted RBP12.65□□□□□ -0.38
IFT140-204ENST00000439987 SORDQ00796 357 aa12.65□□□□□ -0.38
IFT140-204ENST00000439987 OR2F1Q13607 317 aa12.65□□□□□ -0.38
IFT140-204ENST00000439987 TMEM128Q5BJH2 165 aa12.65□□□□□ -0.38
IFT140-204ENST00000439987 UNQ6494/PRO21346Q6UXR6 183 aa12.65□□□□□ -0.38
IFT140-204ENST00000439987 NEK7Q8TDX7 302 aa12.65□□□□□ -0.38
IFT140-204ENST00000439987 TRAV24A0A0B4J272 114 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 NXPH2O95156 264 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 GLAP06280 429 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 VAMP1P23763 118 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 CD34P28906 385 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 DHRS11Q6UWP2 260 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 KCNRGQ8N5I3 272 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 ZCCHC14Q8WYQ9 949 aaKnown RBP12.65□□□□□ -0.39
IFT140-204ENST00000439987 RTBDNQ9BSG5 229 aaPredicted RBP12.65□□□□□ -0.39
IFT140-204ENST00000439987 PDCD10Q9BUL8 212 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 TLNRD1Q9H1K6 362 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 WDR13Q9H1Z4 485 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 ESRP2Q9H6T0 727 aaKnown RBP12.65□□□□□ -0.39
IFT140-204ENST00000439987 DUSP13Q9UII6 198 aa12.65□□□□□ -0.39
IFT140-204ENST00000439987 TMEM218A2RU14 115 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 HS3ST1O14792 307 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 IGHV3-13P01766 116 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 PI3P19957 117 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 CD40P25942 277 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 ECI1P42126 302 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 SRSF7Q16629 238 aaKnown RBP eCLIP12.64□□□□□ -0.39
IFT140-204ENST00000439987 DCAF12L2Q5VW00 463 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 DHRS7BQ6IAN0 325 aaPredicted RBP12.64□□□□□ -0.39
IFT140-204ENST00000439987 Q6P435 159 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 Q6ZS49 121 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 LRP11Q86VZ4 500 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 C11orf53Q8IXP5 236 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 MITD1Q8WV92 249 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 GTF3AQ92664 365 aaKnown RBP12.64□□□□□ -0.39
IFT140-204ENST00000439987 RDH5Q92781 318 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 TMEM230Q96A57 120 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 TRGV8A0A0C4DH27 118 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 DEGS1O15121 323 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 ZNF44P15621 663 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 POLR2GP62487 172 aaKnown RBP eCLIP12.64□□□□□ -0.39
IFT140-204ENST00000439987 RBM39Q14498 530 aaKnown RBP12.64□□□□□ -0.39
IFT140-204ENST00000439987 PAN3Q58A45 887 aaKnown RBP12.64□□□□□ -0.39
IFT140-204ENST00000439987 POC1AQ8NBT0 407 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 TMEM171Q8WVE6 324 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 LIME1Q9H400 295 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 DECR2Q9NUI1 292 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 MEMO1Q9Y316 297 aa12.64□□□□□ -0.39
IFT140-204ENST00000439987 PLCE1Q9P212 2302 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 NUDT19A8MXV4 375 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 DUS4LO95620 317 aaKnown RBP12.63□□□□□ -0.39
IFT140-204ENST00000439987 KLF3P57682 345 aaPredicted RBP12.63□□□□□ -0.39
IFT140-204ENST00000439987 ZNF146Q15072 292 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 PHB2Q99623 299 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 RIMS4Q9H426 269 aaPredicted RBP12.63□□□□□ -0.39
IFT140-204ENST00000439987 HES4Q9HCC6 221 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 Q9N2K0 584 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 CD8AP01732 235 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 GLRA1P23415 457 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 CASP6P55212 293 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 RPS23P62266 143 aaKnown RBP12.63□□□□□ -0.39
IFT140-204ENST00000439987 MZT1Q08AG7 82 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 PRAMEF6Q5VXH4 476 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 LPCAT3Q6P1A2 487 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 VHLLQ6RSH7 139 aa12.63□□□□□ -0.39
IFT140-204ENST00000439987 ZNF826PQ6ZT77 177 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms