RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 EDN3P14138 238 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 ZNF25P17030 456 aaPredicted RBP7.84□□□□□ -1.16
COPB1-202ENST00000439561 DTYMKP23919 212 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 NPBWR2P48146 333 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 PHYHD1Q5SRE7 291 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 AAED1Q7RTV5 226 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 C16orf82Q7Z2V1 217 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 YRDCQ86U90 279 aaKnown RBP7.84□□□□□ -1.16
COPB1-202ENST00000439561 MOB3AQ96BX8 217 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 PCGF1Q9BSM1 259 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 TMEM222Q9H0R3 208 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 LYRM2Q9NU23 88 aaPredicted RBP7.84□□□□□ -1.16
COPB1-202ENST00000439561 PLA2G3Q9NZ20 509 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 RARRES3Q9UL19 164 aa7.84□□□□□ -1.16
COPB1-202ENST00000439561 ZNF407Q9C0G0 2248 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 KNTC1P50748 2209 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 PROB1E7EW31 1015 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 C5orf67F2Z3F1 127 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 ZNF737O75373 536 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 CYB5R3P00387 301 aaPredicted RBP7.83□□□□□ -1.16
COPB1-202ENST00000439561 OPN1MWP04001 364 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 OPN1MW2P0DN77 364 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 OPN1MW3P0DN78 364 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 SELLP14151 372 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 VDAC1P21796 283 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 COL19A1Q14993 1142 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 TMEM41BQ5BJD5 291 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 SPSB3Q6PJ21 355 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 CLDND2Q8NHS1 167 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 POC1BQ8TC44 478 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 PSMF1Q92530 271 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 TMEM18Q96B42 140 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 C18orf12Q96KH6 178 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 DDA1Q9BW61 102 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 TM2D1Q9BX74 207 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 MTCH2Q9Y6C9 303 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 A0A096LPE4 126 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 A0A1W2PPZ6 126 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 TRAPPC2LH3BP13 241 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 PSMB3P49720 205 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 GPM6AP51674 278 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 TAS2R30P59541 319 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 UBE2G2P60604 165 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 HBG1P69891 147 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 HBG2P69892 147 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 ZNF818PQ6ZRF7 136 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 MRPL21Q7Z2W9 205 aaKnown RBP7.83□□□□□ -1.16
COPB1-202ENST00000439561 MKXQ8IYA7 352 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 ADPRHL1Q8NDY3 354 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 OR1F12Q8NHA8 337 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 LYPD6BQ8NI32 183 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 OR51I2Q9H344 312 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 SMDT1Q9H4I9 107 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 C19orf25Q9UFG5 118 aaPredicted RBP7.83□□□□□ -1.16
COPB1-202ENST00000439561 IL17BQ9UHF5 180 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 PRSS50Q9UI38 385 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 ERRFI1Q9UJM3 462 aaPredicted RBP7.83□□□□□ -1.16
COPB1-202ENST00000439561 R4GN57 208 aa7.83□□□□□ -1.16
COPB1-202ENST00000439561 NCOA6Q14686 2063 aaPredicted RBP7.83□□□□□ -1.16
COPB1-202ENST00000439561 AQP7P3A6NL99 342 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 RRP8O43159 456 aaKnown RBP7.82□□□□□ -1.16
COPB1-202ENST00000439561 PDGFBP01127 241 aaPredicted RBP7.82□□□□□ -1.16
COPB1-202ENST00000439561 CELA2AP08217 269 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 IGFBP4P22692 258 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 CCR5P51681 352 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 COL10A1Q03692 680 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 BAXQ07812 192 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 HYAL1Q12794 435 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 TMEM241Q24JQ0 296 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 HLA-BQ31612 363 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 BSXQ3C1V8 233 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 ZNF506Q5JVG8 444 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 SPACA9Q96E40 222 aaPredicted RBP7.82□□□□□ -1.16
COPB1-202ENST00000439561 RBKSQ9H477 322 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 Q9N2K0 584 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 PNRC2Q9NPJ4 139 aaKnown RBP7.82□□□□□ -1.16
COPB1-202ENST00000439561 ANAPC10Q9UM13 185 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 A0A0U1RQV5 110 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 A0A1W2PNV4 684 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 LMO7DNF2Z398 122 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 ZXDAP98168 799 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 P2RY6Q15077 328 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 CEACAM16Q2WEN9 425 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 SELENOHQ8IZQ5 122 aaKnown RBP7.82□□□□□ -1.16
COPB1-202ENST00000439561 OR2M3Q8NG83 312 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 OR1P1Q8NH06 330 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 OR4X1Q8NH49 305 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 OR10J5Q8NHC4 309 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 IL22RA2Q969J5 263 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 PRRG4Q9BZD6 226 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 VSIRQ9H7M9 311 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 ZNF320A2RRD8 509 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 MBP02144 154 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 CD55P08174 381 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 PNRC1Q12796 327 aaPredicted RBP7.82□□□□□ -1.16
COPB1-202ENST00000439561 IL24Q13007 206 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 ENDOGQ14249 297 aaKnown RBP7.82□□□□□ -1.16
COPB1-202ENST00000439561 SLC10A1Q14973 349 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 OR4D5Q8NGN0 318 aa7.82□□□□□ -1.16
COPB1-202ENST00000439561 RASL10BQ96S79 203 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms